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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 20:07:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

50-L026565.SEQ Pigeonpea genomic pGEM-T library Cajanus cajan genomic 3', genomic survey sequence.
CZ682014.1:562-581
AAGCTTCAACATAGAAATCTTGTGGCATTC562ATCGGCTTTTGTCTTGATGAGCAACACCAAATACTTATTTATGAATATGT
96-L025670.SEQ Pigeonpea genomic pGEM-T library Cajanus cajan genomic 5', genomic survey sequence.
DU169862.1:178-197
AATCTTCCACATACAAGTCTTGTGGCATTC178ATCGGCTTTTGTCTTGATGAGCATCACCAAAGACCTATTTATGAATATGT
Barbarea vulgaris genome assembly, chromosome: 6.
OY763892.1:19684963-19684982
TGGAATCGGGCTTCCAAGAAGAGCAAGAGC19684963ATCGGCTTTTGTCTTGATGAGTTGCATATACCCATCAATGGTGATTGTAC
Barbarea vulgaris genome assembly, chromosome: 8.
OY763894.1:18599485-18599504
GGGAATCGGGCTTCCAAGAAGAGCAAGAGC18599485ATCGGCTTTTGTCTTGATGAGTTGCATATAAGCATCAATGGTGGTTGTAC
Contig0795.SEQ Pigeonpea genomic pBluescript and pGEM-T library Cajanus cajan genomic 5', genomic survey sequence.
DU169871.1:305-324
ACATATTCATAAATAAGTATTTGGTGTTGC305TCATCAAGACAAAAGCCGATGAATGCCACAAGATTTCTATGTTGAAGCTT
Barbarea vulgaris genome assembly, chromosome: 8.
OY763894.1:19499856-19499875
GTACAACCACCATTGATGCTTATATGCAAC19499856TCATCAAGACAAAAGCCGATGCTCTTGCTCTTCTTGGAAGTCTGATTCCC
Comamonas sp. ZM22 chromosome, complete genome.
CP125947.1:1265887-1265906
GACGACTGCTGTAGGCATGCTGCGGGCCGT1265887TCATCAAGACAAAAGCCGATGCCCCCGCCTTTGAACGAGCTGGCTTCACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/atcggcttttgtcttgatga
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : atcggcttttgtcttgatga | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.376 | 0.367 | search_plus_done; http://172.18.8.135:50400/match?q=ATCGGCTTTTGTCTTGATGA&k=0&no_gap=0&offset=0&limit=50
0.486 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=TCATCAAGACAAAAGCCGAT&k=0&no_gap=0&offset=0&limit=46
0.488 | 0.002 | cgi_end;

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