GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 13:50:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS14009D09 KS14 Capsicum annuum cDNA, mRNA sequence.
GD058270.1:74-97
CATTAGTGAAGAACGTATTATAGTTGATTC74ATCTCCTGAGTACCCTGTTGAGTCAATCCAGGTGCATATTAGCAATGTGCAATC
KS14013E08 KS14 Capsicum annuum cDNA, mRNA sequence.
GD058650.1:87-110
CATTAGTGAAGAACGTATTATAGTTGATTC87ATCTCCTGAGTACCCTGTTGAGTCAATCCAGGTGCATATTAGCAATGTGCAATC
KS14057F04 KS14 Capsicum annuum cDNA, mRNA sequence.
GD062733.1:87-110
CATTAGTGAAGAACGTATTATAGTTGATTC87ATCTCCTGAGTACCCTGTTGAGTCAATCCAGGTGCATATTAGCAATGTGCAATC
KS17053B10 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080440.1:66-89
CATTAGTGAAGAACGTATTATAGTTGATTC66ATCTCCTGAGTACCCTGTTGAGTCAATCCAGGTGCATATTAGCAATGTGCAATC
KS19032B01 KS19 Capsicum annuum cDNA, mRNA sequence.
GD090232.1:18-41
GCACGAGGACTTTATTC18ATCTCCTGAGTACCCTGTTGAGTCAATCCAGGTGCATATTAGCAATGTGCAATC
KS20038E05 KS20 Capsicum annuum cDNA, mRNA sequence.
GD096838.1:158-181
CATTAGTGAAGAACGTATTATAGTTGATTC158ATCTCCTGAGTACCCTGTTGAGTCAATCCAGGTGCATATTAGCAATGTGCAATC
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:291347954-291347977
CATTAGTGAAGAACGTATTATAGTTGATTC291347954ATCTCCTGAGTACCCTGTTGAGTCAATCCAGGTGCATATTAGCAATGTGCAATC
TSA: Capsicum annuum MGMT_Contig37494 mRNA sequence.
JW087738.1:1601-1624
GATTGCACATTGCTAATATGCACCTGGATT1601GACTCAACAGGGTACTCAGGAGATGAATCAACTATAATACGTTCTTCACTAATG
TSA: Capsicum annuum CMCs80_5530, mRNA sequence.
JW127937.1:699-722
GATTGCACATTGCTAATATGCACCTGGATT699GACTCAACAGGGTACTCAGGAGATGAATCAACTATAATACGTTCTTCACTAATG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:759462-759485
GATTGCACATTGCTAATATGCACCTGGATT759462GACTCAACAGGGTACTCAGGAGATGAATCAACTATAATACGTTCTTCACTAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/atctcctgagtaccctgttgagtc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : atctcctgagtaccctgttgagtc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.914 | 0.905 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTCCTGAGTACCCTGTTGAGTC&k=0&no_gap=0&offset=0&limit=50
1.060 | 0.146 | search_minus_done; http://172.18.8.135:50400/match?q=GACTCAACAGGGTACTCAGGAGAT&k=0&no_gap=0&offset=0&limit=43
1.062 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).