GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:10:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Amphipyra tragopoginis genome assembly, chromosome: 24.
HG992015.1:142577-142596
TCCGTTTCTACAAAATTTATAGACATATGA142577ATCTTTTGGTGCTCCCACACTGGTGTTACAAAATGTTTACTAACATTAGT
Fissipunctia ypsillon genome assembly, chromosome: 2.
OX387645.1:8898525-8898544
CAACCGCCTAAGTAATTTATCTAATATGAT8898525ATCTTTTGGTGCTCCCACACTGGTGTTAAAAAATGTTCGTGGGAGCACCA
Polyommatus iphigenia genome assembly, chromosome: 3.
OY730180.1:5981367-5981386
AACAATTTTGGCAATCGTCAATCAACTGGC5981367ATCTTTTGGTGCTCCCACACCGCCGTTATGGCTGGTTTACACGTATTAAG
Xanthorhoe spadicearia genome assembly, chromosome: 18.
OX352212.1:2621505-2621524
AAAAATGTTTATAAACATTTTGTAACAGCA2621505GTGTGGGAGCACCAAAAGATAGTTGTCGGTTTTCTTTTGTTTCAAAGAGT
Euzophera pinguis genome assembly, chromosome: 16.
OX376170.1:3902358-3902377
GAAAACGTTTGTAAACATTTTATAATGTCA3902358GTGTGGGAGCACCAAAAGATAAAGGTTGACCTTTAGACAATTATCCATAA
Rhodophaea formosa genome assembly, chromosome: Z.
OY720203.1:25568670-25568689
CACATTGTTATATAACGTTATATATCTGCT25568670GTGTGGGAGCACCAAAAGATTACATAGTTATATTTGAGCCGCTCGTTTCC
Rhodophaea formosa genome assembly, chromosome: 13.
OY720216.1:19067183-19067202
ATACATTGTTATATAACGTTATATAAAGCT19067183GTGTGGGAGCACCAAAAGATTACCAAATATTAAATCACACATTTGCATGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/atcttttggtgctcccacac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : atcttttggtgctcccacac | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.218 | 0.209 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTTTTGGTGCTCCCACAC&k=0&no_gap=0&offset=0&limit=50
0.303 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTGGGAGCACCAAAAGAT&k=0&no_gap=0&offset=0&limit=47
0.306 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).