GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 13:37:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dicrocoelium dendriticum genome assembly, chromosome: 2.
OX104064.1:166561720-166561739
CCGTAGTAAACCAGTGTGCAACATCAGTGA166561720ATGCCAACAAAAGCATAGCCGCCCACAATAATAAGATAAAGGGGTTACAA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:8674341-8674360
CTCAATACAAACACAGATTGGCATGCTGAT8674341GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:8898873-8898892
CTCAATACAAACACAGATTGGCATGCTGAT8898873GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:8578555-8578574
CTCAATACAAACACAGATTGGCATGCTGAT8578555GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG
Malus domestica genome assembly, chromosome: 10.
OU696686.1:8941076-8941095
CTCAATACAAACACAGATTGGCATGCTGAT8941076GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:8648951-8648970
CTCAATACAAACACAGATTGGCATGCTGAT8648951GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:8637725-8637744
CTCAATACAAACACAGATTGGCATGCTGAT8637725GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:8300115-8300134
CTCAATACAAACACAGATTGGCATGCTGAT8300115GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:5551230-5551249
TCAATACAAACACAGAATTGGCATGCTGAT5551230GGCTATGCTTTTGTTGGCATTTCAGCTGAGGACTGCAATTACGACACTAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/atgccaacaaaagcatagcc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : atgccaacaaaagcatagcc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCCAACAAAAGCATAGCC&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTATGCTTTTGTTGGCAT&k=0&no_gap=0&offset=0&limit=49
0.144 | 0.005 | cgi_end;

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