GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 04:24:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

UCRPT01_02ca08_b1 Poncirus trifoliata CTV-challenged cDNA library - AGI Citrus trifoliata cDNA clone UCRPT01_02ca08, mRNA sequence.
CD575004.1:655-672
ATTTCCAGACGAATTCGAACCAGCTTCGAG655ATGCGCTGACTCGGAATCAAGTCCTTTAAATCCTCCCCCGAGTCAATT
TSA: Tigriopus californicus SCN_Contig31004.Tcal3 mRNA sequence.
JW536127.1:125-142
CCACGGGATCAGACTCGCCCAATCTATTGG125ATGCGCTGACTCGGAATCGATACTCATGTCCCTTCAATAGTCCAATGG
UCRPT01_02ca08_g1 Poncirus trifoliata CTV-challenged cDNA library - AGI Citrus trifoliata cDNA clone UCRPT01_02ca08, mRNA sequence.
CD575005.1:521-538
AATTGACTCGGGGGAGGATTTAAAGGACTT521GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
CGF1004226_C11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_C11 5', mRNA sequence.
CK934827.1:667-684
AATTGACTCGGGGGAGGATTTAAAGGACTT667GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
C01004F04SK Veg1 Citrus clementina cDNA clone C01004F04, mRNA sequence.
CX287093.1:430-447
AATTGACTCGGGGGAGGATTTAAAGGACTT430GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAA
UCRPT01_5_005_G11_T3 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_005_T3_G11, mRNA sequence.
CX543269.1:512-529
AATTGACTCGGGGGAGGATTTAAAGGACTT512GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
Volcani_2_01_F04 Volcani02 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
DN798991.1:537-554
AATTGACTCGGGGGAGGATTTAAAGGACTT537GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA18BG01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY265818.1:480-497
AATTGACTCGGGGGAGGATTTAAAGGACTT480GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA32DD10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY273048.1:482-499
AATTGACTCGGGGGAGGATTTAAAGGACTT482GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA44BF04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY277633.1:509-526
AATTGACTCGGGGGAGGATTTAAAGGACTT509GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA49DG09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY279633.1:525-542
AATTGACTCGGGGGAGGATTTAAAGGACTT525GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA52AA11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY280736.1:522-539
AATTGACTCGGGGGAGGATTTAAAGGACTT522GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA54BD02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY281575.1:513-530
AATTGACTCGGGGGAGGATTTAAAGGACTT513GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA6AC12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY288246.1:519-536
AATTGACTCGGGGGAGGATTTAAAGGACTT519GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA71BF02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY289075.1:523-540
AATTGACTCGGGGGAGGATTTAAAGGACTT523GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA73DC08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY289872.1:522-539
AATTGACTCGGGGGAGGATTTAAAGGACTT522GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA75AC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY290316.1:570-587
AATTGACTCGGGGGAGGATTTAAAGGACTT570GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA7CD07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY292302.1:517-534
AATTGACTCGGGGGAGGATTTAAAGGACTT517GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA88AA06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY295337.1:570-587
AATTGACTCGGGGGAGGATTTAAAGGACTT570GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA90BH03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY296609.1:517-534
AATTGACTCGGGGGAGGATTTAAAGGACTT517GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA91CE02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY297024.1:513-530
AATTGACTCGGGGGAGGATTTAAAGGACTT513GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA94DB01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY298148.1:509-526
AATTGACTCGGGGGAGGATTTAAAGGACTT509GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA9CC07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY300229.1:525-542
AATTGACTCGGGGGAGGATTTAAAGGACTT525GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
KN0AAQ2YL10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302347.1:485-502
AATTGACTCGGGGGAGGATTTAAAGGACTT485GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
KN0AAQ4YK20RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY303048.1:519-536
AATTGACTCGGGGGAGGATTTAAAGGACTT519GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
KN0AAM3CG10RM1 SLH Citrus sinensis cDNA 5', mRNA sequence.
DY306134.1:507-524
AATTGACTCGGGGGAGGATTTAAAGGACTT507GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
CS00-C1-101-028-H11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY661058.1:533-550
AATTGACTCGGGGGAGGATTTAAAGGACTT533GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
CS00-C1-650-003-D07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY679732.1:126-143
AATTGACTCGGGGGAGGATTTAAAGGACTT126GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
PT11-C1-900-020-D12-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY811527.1:527-544
AATTGACTCGGGGGAGGATTTAAAGGACTT527GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA44BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA44BF04, mRNA sequence.
FC879042.1:509-526
AATTGACTCGGGGGAGGATTTAAAGGACTT509GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA94DB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94DB01, mRNA sequence.
FC882172.1:509-526
AATTGACTCGGGGGAGGATTTAAAGGACTT509GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA75AC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA75AC06, mRNA sequence.
FC883786.1:570-587
AATTGACTCGGGGGAGGATTTAAAGGACTT570GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
KN0AAQ2YL10RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ2YL10, mRNA sequence.
FC884807.1:485-502
AATTGACTCGGGGGAGGATTTAAAGGACTT485GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA52AA11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA52AA11, mRNA sequence.
FC885665.1:522-539
AATTGACTCGGGGGAGGATTTAAAGGACTT522GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA91CE02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA91CE02, mRNA sequence.
FC886321.1:513-530
AATTGACTCGGGGGAGGATTTAAAGGACTT513GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA49DG09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49DG09, mRNA sequence.
FC890571.1:525-542
AATTGACTCGGGGGAGGATTTAAAGGACTT525GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
KN0AAQ4YK20RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ4YK20, mRNA sequence.
FC891972.1:519-536
AATTGACTCGGGGGAGGATTTAAAGGACTT519GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA73DC08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73DC08, mRNA sequence.
FC893419.1:522-539
AATTGACTCGGGGGAGGATTTAAAGGACTT522GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA7CD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA7CD07, mRNA sequence.
FC895385.1:517-534
AATTGACTCGGGGGAGGATTTAAAGGACTT517GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA88AA06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88AA06, mRNA sequence.
FC897117.1:570-587
AATTGACTCGGGGGAGGATTTAAAGGACTT570GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA90BH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA90BH03, mRNA sequence.
FC898289.1:517-534
AATTGACTCGGGGGAGGATTTAAAGGACTT517GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA32DD10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA32DD10, mRNA sequence.
FC899367.1:482-499
AATTGACTCGGGGGAGGATTTAAAGGACTT482GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA6AC12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA6AC12, mRNA sequence.
FC899518.1:519-536
AATTGACTCGGGGGAGGATTTAAAGGACTT519GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA54BD02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA54BD02, mRNA sequence.
FC901059.1:513-530
AATTGACTCGGGGGAGGATTTAAAGGACTT513GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA9CC07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA9CC07, mRNA sequence.
FC902931.1:525-542
AATTGACTCGGGGGAGGATTTAAAGGACTT525GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA18BG01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA18BG01, mRNA sequence.
FC907431.1:480-497
AATTGACTCGGGGGAGGATTTAAAGGACTT480GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
IC0AAA71BF02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA71BF02, mRNA sequence.
FC915904.1:523-540
AATTGACTCGGGGGAGGATTTAAAGGACTT523GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
C32101B08EF RVDevelopN Citrus clementina cDNA clone C32101B08, mRNA sequence.
FC921105.1:533-550
AATTGACTCGGGGGAGGATTTAAAGGACTT533GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
KN0AAM3CG10RM1 SLH Citrus sinensis cDNA clone KN0AAM3CG10, mRNA sequence.
FC922212.1:507-524
AATTGACTCGGGGGAGGATTTAAAGGACTT507GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
TSA: Tigriopus californicus SD_Contig3608.Tcal3 mRNA sequence.
JW504310.1:258-275
CCATTGGACTATTGAAGGGACATGAGTATC258GATTCCGAGTCAGCGCATCCAATAGATTGGGGGAGTCTGACCCCGTGG
TSA: Cyclocybe aegerita AA_22880, mRNA sequence.
JW852917.1:98-115
ACAACCGCGCAGCAGGTATCGACAGGCAAC98GATTCCGAGTCAGCGCATCGACGCGCGAGGAATCTCGCCATCGCTCCA
Aegilops umbellulata cultivar TA1851 chromosome 6U.
CP136059.1:413566109-413566126
ACAGCAGCGTACCTTGGTGAGGGAGGGTTC413566109GATTCCGAGTCAGCGCATTTGTTTTTCTGGATTAGAACACAGGGGGAA
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:4418781-4418798
AATTGACTCGGGGGAGGATTTAAAGGACTT4418781GATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGGAAAT
Udea ferrugalis genome assembly, chromosome: 13.
OX465528.1:3122165-3122182
TCGTGTCACGATAGTGATAGAGATTTTATC3122165GATTCCGAGTCAGCGCATCACTAGTGGAAGCTGTGATGGATGGCTAAC
Aporrectodea icterica genome assembly, chromosome: 15.
OY744616.1:454629-454646
ATGCTGAAGAATTTACTGAAGAAGGAAAAG454629GATTCCGAGTCAGCGCATGAGCTTCAGAGACAAGTAGAGTACGATGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).