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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 09:10:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:2753463-2753482
GTCTTCGTGACTATCTTTCTCTCTTTTTCT2753463ATGTCGATGTCGCTCTGTTGGGGAAACGGAAAACTAATCCTTCTAGAGAG
Stenoptilia bipunctidactyla genome assembly, chromosome: 1.
OX101722.1:31339924-31339943
GGAATAAATTGACGAAGTGGGGGTTCCAAG31339924ATGTCGATGTCGCTCTGTTGAATGAAACGAGGTGGAAAACAATCGACTCA
010512AAWA002106HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA002106, mRNA sequence.
EB132889.1:42-61
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC42CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
TSA: Pyrus x bretschneideri Unigene69360_XinShao mRNA sequence.
JR655848.1:45-64
CTCTCTAGAAGGATTAGTTATCCGTTTCCC45CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGAGAGTCACGAAGAC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:6109032-6109051
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6109032CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:5830964-5830983
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5830964CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:6050423-6050442
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6050423CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:6023283-6023302
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6023283CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:5901012-5901031
CTCTCTAGAAGGATTAGTTTTCCTTTTCCC5901012CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGAGAGTCACGAAGAA
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:5788877-5788896
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5788877CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU696686.1:6073434-6073453
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6073434CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU744551.1:5930769-5930788
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5930769CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU744962.1:5956745-5956764
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5956745CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU745000.1:5511302-5511321
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5511302CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:5531931-5531950
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5531931CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:8127008-8127027
CTCTCTAAAAGGATTAGTTTTCCGTTTCCC8127008CAACAGAGCGACATCGACATAGAAAGCAGAGAAAGAGAGTCGCGCAGACA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:3446940-3446959
CTCTCTAGAAGGATTAGTTATCCGTTTCCC3446940CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGAGAGTCACGAAGAC
Helleia helle genome assembly, chromosome: 6.
OY971419.1:17894125-17894144
GTGCGTCAAACTTGCGGCTGAATCCTCGGC17894125CAACAGAGCGACATCGACATCTATTTGATTTTGCAACGTCTTACTAAATT

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