GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 21:19:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Gallus gallus breed Huxu chromosome 19.
CP100573.1:4279305-4279324
GGTAATGCTGGCCTAAGTGTGGTCTTGAGT4279305CAAACCAATGCCAACAACAGCAGCAGTAACAGAAAAGAATGCAACTAATT
Meleagris gallopavo genome assembly, chromosome: 21.
OW982273.1:3089040-3089059
GGTAATGGTCACATAAGAGAGGTTTTGAGT3089040CAAACCAATGCCAACAACAGCAGCAGTAACAGAAAAGAATGCAACTAATT
Meleagris gallopavo genome assembly, chromosome: 21.
OW982312.1:3135560-3135579
GGTAATGGTCACATAAGAGAGGTTTTGAGT3135560CAAACCAATGCCAACAACAGCAGCAGTAACAGAAAAGAATGCAACTAATT
Trifolium pratense DNA, clone:RC0164f.ab1.
DE244883.1:222-241
ATCATTTCTAATTCAGTTTTCTGTCCAATA222CAAACCAATGCCAACAACAGGACGAAATCACTATTCATCACCATCACATA
Chrysanthemum makinoi genome assembly, chromosome: 7.
OU343223.1:204621836-204621855
ATCCCGTCTTTTAACCTTCTTTTCCCTGGG204621836CAAACCAATGCCAACAACAGAAGTCATAGTTTTCCGAACCCTTATAACAA
Dunaliella primolecta genome assembly, chromosome: 8.
OU611758.1:10015402-10015421
CCAACAAGAGGCTGTGCCGCTGTGGGCACC10015402CAAACCAATGCCAACAACAGGCTGACGCACAGACAAACACCAACAAGAGG
Dunaliella primolecta genome assembly, chromosome: 8.
OU611758.1:10015471-10015490
CCAACAAGAGGCTGTGCCGCCGTGGGCACC10015471CAAACCAATGCCAACAACAGGCTGTGTCGACATGGGCACCCAAACCAATG
Dunaliella primolecta genome assembly, chromosome: 8.
OU611758.1:10015511-10015530
CCAACAACAGGCTGTGTCGACATGGGCACC10015511CAAACCAATGCCAACAACAGGCTGCGTCGACATGGGAACCCAAACCAATG
Dunaliella primolecta genome assembly, chromosome: 8.
OU611758.1:10015551-10015570
CCAACAACAGGCTGCGTCGACATGGGAACC10015551CAAACCAATGCCAACAACAGGCTGACGCACAGACAAACACCAACAAGAGG
Dunaliella primolecta genome assembly, chromosome: 8.
OU611758.1:10015620-10015639
CCAACAAGAGGCTGTGTCGCTGTGGGTACC10015620CAAACCAATGCCAACAACAGGCTGCTGCATGCGGCCCCTCGAGCGCAGAA
Membranipora membranacea genome assembly, chromosome: 7.
OU612071.1:20412279-20412298
TCAAATGCAATGGAATCGCTGAAAAGTAAA20412279CAAACCAATGCCAACAACAGCACAACTCAACAACAAAGCACACAAGGTGC
Hyperoodon ampullatus genome assembly, chromosome: 6.
OX457061.1:127242659-127242678
ACACGGATGCTTGTTTAAGAGATCTGAAGG127242659CTGTTGTTGGCATTGGTTTGATTCACAGGAAAGGGCAATACCACCAATCA
Lagenorhynchus albirostris genome assembly, chromosome: 7.
OX459079.1:114113329-114113348
ACACGGATGCTTGTTTAAGAGATCTGAAGG114113329CTGTTGTTGGCATTGGTTTGATTCACAGGAAAGGGCAATACCACCAATCA
Plesiomonas shigelloides strain P5462 chromosome, complete genome.
CP062196.1:1139949-1139968
GAGATCAAATTTGTCATTTTCCTTGCGCCG1139949CTGTTGTTGGCATTGGTTTGGCTGTCGCCTAGTTATATTCGCGGGATGAA
Plesiomonas shigelloides strain Colony20 chromosome.
CP076371.1:1161921-1161940
GAAATCAAGTTTGTCATTTTCCTTGCGCCG1161921CTGTTGTTGGCATTGGTTTGGCTGTCGCCTAGTTATATTCGCGGGATGAA
Sepiola atlantica genome assembly, chromosome: 1.
OY744515.1:191548749-191548768
AAAGGTAAAACATTTTTGACTGGCCTGATT191548749CTGTTGTTGGCATTGGTTTGCCCAATTCTTTCTAGAATCAACTATTTACA
Sepiola atlantica genome assembly, chromosome: 2.
OY744516.1:123860787-123860806
TGAATTATCTTTTTTAAAACCTGTTTGATT123860787CTGTTGTTGGCATTGGTTTGCTCGATTCATTTTTAGAATTAAGTACTCAC
Sepiola atlantica genome assembly, chromosome: 3.
OY744517.1:69795351-69795370
CGGCATGTTGAGATTTTAGCCTGCTGTATC69795351CTGTTGTTGGCATTGGTTTGCCTAATTTCTCTTCAGAATCAGGCACCCAC
Sepiola atlantica genome assembly, chromosome: 10.
OY744524.1:64760985-64761004
CATGGTACGACTTTTTTGACCGGCTTTAAT64760985CTGTTGTTGGCATTGGTTTGTACGTATGTTATCACCTTTCACACCCATTA
Sepiola atlantica genome assembly, chromosome: 12.
OY744526.1:24581736-24581755
TATGCTGCGACTTTTTTGACCAGCTTCATT24581736CTGTTGTTGGCATTGGTTTGATCGATGCTTTCTAGAATCAGGTACTCACA
Sepiola atlantica genome assembly, chromosome: 16.
OY744530.1:8164866-8164885
GAGGATGCCATATTTTCATTTCTTCTTTTT8164866CTGTTGTTGGCATTGGTTTGCCGGATTCTTTCTAGAATCAGTTACTTACA
Sepiola atlantica genome assembly, chromosome: 19.
OY744533.1:46358985-46359004
CATGATACGATTTTATTGACCGGCTCGATT46358985CTGTTGTTGGCATTGGTTTGCCCCCATGTTTTTTAGAATCAGATACTAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/caaaccaatgccaacaacag
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : caaaccaatgccaacaacag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.173 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=CAAACCAATGCCAACAACAG&k=0&no_gap=0&offset=0&limit=50
0.212 | 0.038 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTTGTTGGCATTGGTTTG&k=0&no_gap=0&offset=0&limit=39
0.219 | 0.007 | cgi_end;

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