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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 21:14:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Oryzias latipes strain HSOK chromosome 1.
CP020621.1:7010463-7010480
AGTCGTCCTGTCCCATGCGCAGAAAAACAC7010463CACCATCGCATGATGCACCACCATGCTTCTTCATGGAAGTGGAATGAA
Dehalococcoidia bacterium isolate 65a5fbfc-6c1a-4510-92bc-3c45fb3a16c9 genome assembly, chromosome: 1.
OY759581.1:1524206-1524223
GATCCTGCCGATGCCGTCGTCCATCAACCG1524206CACCATCGCATGATGCACCGATACGAGATTGCGAATGTCGTCGTCGGT
Hordeum vulgare ZCCT-Hc gene, partial cds.
AY687931.1:43-60
ATTGACACAGAGACGATGATAGCGGCTGCC43CACCATCGCATGATGCACGAGAGAGAGGCGAACGTGATGATGTATAGG
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 1.
CP125973.1:506716600-506716617
GAAAAGAAAACTTCCTCCTGCAACATTGTG506716600CACCATCGCATGATGCACATGTATGCACAATATGGTAACATTATCACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828135.1:653581932-653581949
ATTGACACAGAGACGATGATAGCGGCTGCC653581932CACCATCGCATGATGCACGAGAGAGAGGCGAACGTGATGATGTATAGG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828149.2:618173761-618173778
ATTGACACAGAGACGATGATAGCGGCTGCC618173761CACCATCGCATGATGCACGAGAGAGAGGCGAACGTGATGATGTATAGG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828184.1:612765315-612765332
ATTGACACAGAGACGATGATAGCGGCTGCC612765315CACCATCGCATGATGCACGAGAGAGAGGCGAACGTGATGATGTATAGG
Avena insularis genome assembly, chromosome: 3C.
OU342340.1:384000189-384000206
AAAAGGAAAACTTCCTCCTGCAACATTGTT384000189CACCATCGCATGATGCACATGCATGCACAAAATGGAAACATTATCACA
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:474332106-474332123
AAAAGGAAAACTTCCTCCTGCAATATTGTT474332106CACCATCGCATGATGCACATGCATGCACAATATGGGAACATTATCACA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460050.1:600392773-600392790
ATTGACACAGAGACGATGATAGCGGCTGCC600392773CACCATCGCATGATGCACGAGAGAGAGGTGAACGTGATGATGTATAGG
Hordeum vulgare genome assembly, chromosome: 4H.
OX460162.1:597346991-597347008
ATTGACACAGAGACGATGATAGCGGCTGCC597346991CACCATCGCATGATGCACGAGAGAGAGGCGAACGTGATGATGTATAGG
Hordeum vulgare genome assembly, chromosome: 4H.
OX460246.1:596365806-596365823
ATTGACACAGAGACGATGATAGCGGCTGCC596365806CACCATCGCATGATGCACGAGAGAGAGGCGAACGTGATGATGTATAGG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638747.1:290470882-290470899
TCGCCATGTGATCAGATTGTCTGTCACACT290470882CACCATCGCATGATGCACACCATCTGCATTGCATGGGCACTCCATTGC
Agrochola lota genome assembly, chromosome: 10.
OX376228.1:3343172-3343189
CCTGGGTCGAGATTGGTCGTGTTACGGCCC3343172CACCATCGCATGATGCACAGCAGAACTTACAATCGTCATACCTGCGAA
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 6.
CP125978.1:182574025-182574042
TGTGATATTGTGCCCATATTATGCATGCAT182574025GTGCATCATGCGATGGTGAAAAATGTTGCAGGAGGAATTTTTCCCTTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR812264.1:642809091-642809108
CCTATACATCATCACGTTCGCCTCTCTCTC642809091GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828090.1:607172932-607172949
CCTATACATCATCACGTTCGCCTCTCTCTC607172932GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828097.1:608203406-608203423
CCTATACATCATCACGTTCACCTCTCTCTC608203406GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828111.1:591661684-591661701
CCTATACATCATCACGTTCGCCTCTCTCTC591661684GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828142.1:658934056-658934073
CCTATACATCATCACGTTCACCTCTCTCTC658934056GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828163.1:633418284-633418301
CCTATACATCATCACGTTCGCCTCTCTCTC633418284GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828276.1:639668267-639668284
CCTATACATCATCACGTTCGCCTCTCTCTC639668267GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OU015704.1:626844120-626844137
CCTATACATCATCACGTTCACCTCTCTCTC626844120GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Avena sativa genome assembly, chromosome: 4A.
OU342381.1:7624632-7624649
TGTGATAATGTTCTCATATTGTGCATTTAT7624632GTGCATCATGCGATGGTGAACAATGTTGCAGGAGGAAGTTTTCCTTTT
Avena sativa genome assembly, chromosome: 3C.
OU342387.1:115016730-115016747
TGTGATAATGTTTCCATTTTGTGCATGCAT115016730GTGCATCATGCGATGGTGAACAATGTTGCAGGAGGAAGTTTTCCTTTT
Avena longiglumis genome assembly, chromosome: 3A.
OU342749.1:67317495-67317512
TGTGATAATGTTACCATATTGTGCATACAT67317495GTGCATCATGCGATGGTGAACAATGTTGCAGGAGGAAGTTTTCTTTTC
Avena longiglumis genome assembly, chromosome: 4A.
OU342750.1:28256098-28256115
TGTGATAATGTTCTCATATTGTGCATTTAT28256098GTGCATCATGCGATGGTGAACAATGTTGCAGGAGGAAGTTTTCCTTTT
Avena longiglumis genome assembly, chromosome: 6A.
OU342752.1:138678907-138678924
TGTGATATTGTGCCCATATTATGCATGCAT138678907GTGCATCATGCGATGGTGAAAAATGTTGCAGGAGGAAGTTTTCCTTTT
Avena longiglumis genome assembly, chromosome: 7A.
OU342753.1:523846389-523846406
TGTGATAATATGTCCATATTGTGCATACAT523846389GTGCATCATGCGATGGTGAACAATGTTTCAGGAGGATGTTTTCCTTTT
Hordeum vulgare genome assembly, chromosome: 4H.
OU701466.1:559284518-559284535
CCTATACATCATCACGTTCACCTCTCTCTC559284518GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Avena sativa genome assembly, chromosome: 10.
OV702288.1:119079941-119079958
TGTGATAATGTTTCCATTTTGTGCATGCAT119079941GTGCATCATGCGATGGTGAACAATGTTGCAGGAGGAAGTTTTCCTTTT
Avena sativa genome assembly, chromosome: 17.
OV702295.1:48639894-48639911
TGTGATAATGTTCTCATATTGTGCATTTAT48639894GTGCATCATGCGATGGTGAACAATGTTGCAGGAGGAAGTTTTCCTTTT
Hordeum vulgare genome assembly, chromosome: 4H.
OX459926.1:602532863-602532880
CCTATACATCATCACGTTCGCCTCTCTCTC602532863GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX459933.1:604655136-604655153
CCTATACATCATCACGTTCGCCTCTCTCTC604655136GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX459933.1:604708260-604708277
CCTATACATCATCACGTTCGCCTCTCTCTC604708260GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX459973.1:606602128-606602145
CCTATACATCATCACGTTCGCCTCTCTCTC606602128GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX459994.1:595969413-595969430
CCTATACATCATCACGTTCACCTCTCTCTC595969413GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460008.1:597282279-597282296
CCTATACATCATCACGTTCGCCTCTCTCTC597282279GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460015.1:605370458-605370475
CCTATACATCATCACGTTCGCCTCTCTCTC605370458GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460022.1:598459946-598459963
CCTATACATCATCACGTTCGCCTCTCTCTC598459946GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460029.1:604914156-604914173
CCTATACATCATCACGTTCGCCTCTCTCTC604914156GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460071.1:605559365-605559382
CCTATACATCATCACGTTCGCCTCTCTCTC605559365GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460078.1:604337452-604337469
CCTATACATCATCACGTTCACCTCTCTCTC604337452GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460092.1:607588493-607588510
CCTATACATCATCACGTTCCCCTCTCTCTC607588493GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460098.1:603302319-603302336
CCTATACATCATCACGTTCGCCTCTCTCTC603302319GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460106.1:608622919-608622936
CCTATACATCATCACGTTCGCCTCTCTCTC608622919GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460113.1:604361485-604361502
CCTATACATCATCACGTTCGCCTCTCTCTC604361485GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460134.1:608891518-608891535
CCTATACATCATCACGTTCGCCTCTCTCTC608891518GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460141.1:605403032-605403049
CCTATACATCATCACGTTCACCTCTCTCTC605403032GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460141.1:605433690-605433707
CCTATACATCATCACGTTCACCTCTCTCTC605433690GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460169.1:600445081-600445098
CCTATACATCATCACGTTCGCCTCTCTCTC600445081GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460183.1:603003183-603003200
CCTATACATCATCACGTTCACCTCTCTCTC603003183GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460197.1:603357549-603357566
CCTATACATCATCACGTTCACCTCTCTCTC603357549GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460204.1:604642407-604642424
CCTATACATCATCACGTTCGCCTCTCTCTC604642407GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460211.1:601899152-601899169
CCTATACATCATCACGTTCGCCTCTCTCTC601899152GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460218.1:602112658-602112675
CCTATACATCATCACGTTCGCCTCTCTCTC602112658GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460232.1:604497968-604497985
CCTATACATCATCACGTTCACCTCTCTCTC604497968GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460239.1:602372021-602372038
CCTATACATCATCACGTTCGCCTCTCTCTC602372021GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460253.1:604029700-604029717
CCTATACATCATCACGTTCGCCTCTCTCTC604029700GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460267.1:608420586-608420603
CCTATACATCATCACGTTCGCCTCTCTCTC608420586GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460274.1:605047173-605047190
CCTATACATCATCACGTTCACCTCTCTCTC605047173GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460295.1:607006911-607006928
CCTATACATCATCACGTTCGCCTCTCTCTC607006911GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460309.1:604747411-604747428
CCTATACATCATCACGTTCACCTCTCTCTC604747411GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590742.1:625009337-625009354
CCTATACATCATCACGTTCGCCTCTCTCTC625009337GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590751.1:601612807-601612824
CCTATACATCATCACGTTCGCCTCTCTCTC601612807GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX638656.1:605080392-605080409
CCTATACATCATCACGTTCGCCTCTCTCTC605080392GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638745.1:608846307-608846324
CCTATACATCATCACGTTCACCTCTCTCTC608846307GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638780.1:606713298-606713315
CCTATACATCATCACGTTCGCCTCTCTCTC606713298GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX638787.1:601564583-601564600
CCTATACATCATCACGTTCGCCTCTCTCTC601564583GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638815.1:610312127-610312144
CCTATACATCATCACGTTCGCCTCTCTCTC610312127GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX638822.1:605368931-605368948
CCTATACATCATCACGTTCGCCTCTCTCTC605368931GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638829.1:606748209-606748226
CCTATACATCATCACGTTCGCCTCTCTCTC606748209GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638871.1:610274684-610274701
CCTATACATCATCACGTTCACCTCTCTCTC610274684GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638878.1:600635811-600635828
CCTATACATCATCACGTTCGCCTCTCTCTC600635811GTGCATCATGCGATGGTGGGCAGCCGCTATCATCGTCTCTGTGTCAAT
Heterobilharzia americana genome assembly, chromosome: 3.
OX104105.1:76611466-76611483
ATATTATTGCTACTCGTTTGGACTGGCAAC76611466GTGCATCATGCGATGGTGACAAATTAGCTCCTGAAAATCTGCTTGGAT
Heterobilharzia americana genome assembly, chromosome: 3.
OX104129.1:79390590-79390607
ATATTATTGCTACTCGTTTGGACTGGCAAC79390590GTGCATCATGCGATGGTGACAAATTAGCTCCTGAAAATCTGCTTGGAT
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: X.
OX377206.1:52754041-52754058
GTGTTCGAAGTTTTCGGACCGGTGGTGGAC52754041GTGCATCATGCGATGGTGATGAGTCTCCTCAAGGAGATGATCTGGACG
Eupithecia insigniata genome assembly, chromosome: 19.
OX402012.1:10475114-10475131
AAATAGCATCGCGATGGCTTTCCGACCTTC10475114GTGCATCATGCGATGGTGGGTCTATGACCATAATTGTATAGACAACCG
Schoenobius gigantella genome assembly, chromosome: Z.
OZ012540.1:18843462-18843479
TACAGGAAATGTTTTTTATAGCACGCTTGA18843462GTGCATCATGCGATGGTGTACGTCTGATGGCTTCAGGTAGGGAGTTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/caccatcgcatgatgcac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : caccatcgcatgatgcac | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.158 | 0.149 | search_plus_done; http://172.18.8.135:50400/match?q=CACCATCGCATGATGCAC&k=0&no_gap=0&offset=0&limit=50
0.261 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=GTGCATCATGCGATGGTG&k=0&no_gap=0&offset=0&limit=36
0.302 | 0.041 | cgi_end;

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