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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:56:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS26060F03 KS26 Capsicum annuum cDNA, mRNA sequence.
GD135176.1:570-593
CCGAATGGGAGATAGGTTATAACGCGATGA570CAGACAAATATGAGAATCTCGTGGAAGCTGGAGTCAT
Solanum pinnatisectum cultivar CGN17745 chromosome 11.
CP047563.1:41813631-41813654
CCGAATGGGAGATGGGTTATAACGCGATGA41813631CAGACAAATATGAGAATCTCGTGGATGCTGGAGTCATTGATCCAGCCAAGGTGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:3014470-3014493
CCGAATGGGAGATAGGTTATAACGCGATGA3014470CAGACAAATATGAGAATCTCGTGGAAGCTGGAGTCATCGATCCAGCCAAGGTGA
KS14053B03 KS14 Capsicum annuum cDNA, mRNA sequence.
GD062309.1:377-400
TCACCTTGGCTGGATCGATGACTCCAGCTT377CCACGAGATTCTCATATTTGTCTGTCATCGCGTTATAACCTATCTCCCATTCGG
KS26050G07 KS26 Capsicum annuum cDNA, mRNA sequence.
GD134282.1:408-431
TCACCTTGGCTGGATCGATGACTCCAGCTT408CCACGAGATTCTCATATTTGTCTGTCATCGCGTTATAACCTATCTCCCATTCGG
CS01005F07 Hotpepper under oxidative stress Capsicum annuum cDNA 5', mRNA sequence.
GO345398.1:427-450
TCACCTTGGCTGGATCGATGACTCCAGCTT427CCACGAGATTCTCATATTTGTCTGTCATCGCGTTATAACCTATCTCCCATTCGG
TSA: Capsicum annuum MGMT_Contig8962, mRNA sequence.
JW059206.1:495-518
TCACCTTGGCTGGATCGATGACTCCAGCTT495CCACGAGATTCTCATATTTGTCTGTCATCGCGTTATAACCTATCTCCCATTCGG
Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:274374287-274374310
TCACCTTGGCTGGATCGATGACTCCAGCTT274374287CCACGAGATTCTCATATTTGTCTGTCATCGCGTTATAACCTATCTCCCATTCGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/cagacaaatatgagaatctcgtgg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : cagacaaatatgagaatctcgtgg | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.272 | 0.264 | search_plus_done; http://172.18.8.135:50400/match?q=CAGACAAATATGAGAATCTCGTGG&k=0&no_gap=0&offset=0&limit=50
0.651 | 0.379 | search_minus_done; http://172.18.8.135:50400/match?q=CCACGAGATTCTCATATTTGTCTG&k=0&no_gap=0&offset=0&limit=47
0.655 | 0.003 | cgi_end;

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