GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:38:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig23128, mRNA sequence.
JW073372.1:977-1000
GGATCATATTATTGTTAGCAGATGATGATG977CATTTAATCCAGCACCTTTGTCAGCCTCTCCAGCAGCATCATTTGAGAAAGTTG
CHO_OF4985xp12f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH473397.1:637-660
TCATATTATTGTTAGCAGACGATGATGATG637CATTTAATCCAGCACCTTTGTCAGCTTCTCCAGTAGTAACATCATTTGAGAAGT
KR3B.103D20F.051108T7 KR3B Nicotiana tabacum cDNA clone KR3B.103D20, mRNA sequence.
DW002546.1:50-73
CTTTCTCAAATGATGTTACTACTGGAGAAG50CTGACAAAGGTGCTGGATTAAATGCATCATCATCGTCTGCTAACAATAATATGA
Petunia axillaris subsp. axillaris EST, clone dr004P0019P18_F.ab1 2007-08-10.
FN013592.1:268-291
TCACAACTTTCACAAATGATGCTGGAGAAG268CTGACAAAGGTGCTGGATTAAATGCACCGTCTGCTAGCAATAATATGATCCCTT
TSA: Physalis peruviana Php00a00505.04663 mRNA sequence.
JO128755.1:2444-2467
TCTCAAATGATGCTGCTGCTGGAGATCAGG2444CTGACAAAGGTGCTGGATTAAATGTTGCATCATCATCCTCTGCTAACAATAATA
TSA: Physalis peruviana Php00a00505.04664 mRNA sequence.
JO128756.1:2133-2156
TCTCAAATGATGCTGCTGCTGGAGATCAGG2133CTGACAAAGGTGCTGGATTAAATGTTGCATCATCATCCTCTGCTAACAATAATA
TSA: Physalis peruviana Php00a00505.04665 mRNA sequence.
JO128757.1:2279-2302
TCTCAAATGATGCTGCTGCTGGAGATCAGG2279CTGACAAAGGTGCTGGATTAAATGTTGCATCATCATCCTCTGCTAACAATAATA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:198651165-198651188
CAACTTTCTCAAATGATGCTGCTGGAGAGG198651165CTGACAAAGGTGCTGGATTAAATGCATCATCATCTGCTAACAATAATATGATCC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:197819490-197819513
CAACTTTCTCAAATGATGCTGCTGGAGAGG197819490CTGACAAAGGTGCTGGATTAAATGCATCATCATCTGCTAACAATAATATGATCC
Solanum dulcamara genome assembly, chromosome: 4.
OX359255.1:23693750-23693773
CAACTTTCTCAAATGATACTGCTGGAGATG23693750CTGACAAAGGTGCTGGATTAAATGCATCATCCTCTGCTAACAATAATATGATCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/catttaatccagcacctttgtcag
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : catttaatccagcacctttgtcag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.145 | 0.136 | search_plus_done; http://172.18.8.135:50400/match?q=CATTTAATCCAGCACCTTTGTCAG&k=0&no_gap=0&offset=0&limit=50
0.382 | 0.238 | search_minus_done; http://172.18.8.135:50400/match?q=CTGACAAAGGTGCTGGATTAAATG&k=0&no_gap=0&offset=0&limit=48
0.388 | 0.005 | cgi_end;

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