GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 08:05:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

mte1-73D17FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR341283.1:445-466
GCAGAAAGAGAGGAAGATAATCGAAAGAAT445CCACTTCGTACTCGAAGAAACAAAAAGCTCCCAATCCTGAATGGACGGGAAG
Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE.
CR954189.3:418-439
GCAGAAAGAGAGGAAGATAATCGAAAGAAT418CCACTTCGTACTCGAAGAAACAAAAAGCTCCCAATCCTGAATGGACGGGAAG
Medicago truncatula chromosome 5 clone mte1-65b11, COMPLETE SEQUENCE.
CU302330.2:45310-45331
GCAGAAAGAGAGGAAGATAATCGAAAGAAT45310CCACTTCGTACTCGAAGAAACAAAAAGCTCCCAATCCTGAATGGACGGGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ccacttcgtactcgaagaaaca
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ccacttcgtactcgaagaaaca | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.103 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=CCACTTCGTACTCGAAGAAACA&k=0&no_gap=0&offset=0&limit=50
0.118 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTTCTTCGAGTACGAAGTGG&k=0&no_gap=0&offset=0&limit=47
0.118 | 0.000 | cgi_end;

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