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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:18:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:235261818-235261841
CTTCTTCGCTTTACCGGTTGACTCCATTTT235261818CCAGCGAGAAAGATTCTTAGAGAGAGAAAATATTGAATGACTGATTGTTTGTCA
Sequence 14530 from patent US 10766935.
MV657925.1:28-51
CAAACAATCAGTCATTCAATATTTTCT28CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
Sequence 14530 from patent US 11566053.
OS281404.1:28-51
CAAACAATCAGTCATTCAATATTTTCT28CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07001E08 KS07 Capsicum annuum cDNA, mRNA sequence.
BM065248.1:35-58
CGAGAAACAATCAGTCATTCAATATTTTCT35CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07006H12 KS07 Capsicum annuum cDNA, mRNA sequence.
BM065746.1:35-58
CGAGAAACAATCAGTCATTCAATATTTTCT35CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07007C07 KS07 Capsicum annuum cDNA, mRNA sequence.
BM065774.1:30-53
GGCACGAGATCAGTCATTCAATATTTTCT30CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07012D04 KS07 Capsicum annuum cDNA, mRNA sequence.
BM066249.1:35-58
CGAGAAACAATCAGTCATTCAATATTTTCT35CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07014A08 KS07 Capsicum annuum cDNA, mRNA sequence.
BM066402.1:35-58
CGAGAAACAATCAGTCATTCAATATTTTCT35CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07018D04 KS07 Capsicum annuum cDNA, mRNA sequence.
BM066794.1:26-49
GGCACGAGGTCATTCAATATTTTCT26CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07018F08 KS07 Capsicum annuum cDNA, mRNA sequence.
BM066822.1:28-51
GGCACGAGCAGTCATTCAATATTTTCT28CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS07022C07 KS07 Capsicum annuum cDNA, mRNA sequence.
BM067151.1:26-49
GGCACGAGGTCATTCAATATTTTCT26CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS09030E05 KS09 Capsicum annuum cDNA, mRNA sequence.
CA514744.1:26-49
AACAATCAGTCATTCAATATTTTCT26CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS09078B10 KS09 Capsicum annuum cDNA, mRNA sequence.
CA517336.1:34-57
TGACAAACAATCAGTCATTCAATATTTTCT34CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS09086G08 KS09 Capsicum annuum cDNA, mRNA sequence.
CA517641.1:34-57
TGACAAACAATCAGTCATTCAATATTTTCT34CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS11028D11 KS11 Capsicum annuum cDNA, mRNA sequence.
CA521473.1:12-35
CAATATTTTCT12CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
KS24039B01 KS24 Capsicum annuum cDNA, mRNA sequence.
GD121469.1:36-59
AGGCAAACAATCAGTCATTCAATATTTTCT36CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
CS01012C06 Hotpepper under oxidative stress Capsicum annuum cDNA 5', mRNA sequence.
GO345626.1:27-50
GCACGAGGAGTCATTCAATATTTTCT27CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
TSA: Capsicum annuum MGMT_Contig21268, mRNA sequence.
JW071512.1:321-344
AAGGCGACACCCCATTTTTCAATATTTTCT321CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGAAAAGCGAAGAAG
TSA: Capsicum annuum MA_MegaContig_26359, mRNA sequence.
JW159832.1:48-71
TGACAAACAATCAGTCATTCAATATTTTCT48CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:42396675-42396698
TGACAAACAATCAGTCATTCAATATTTTCT42396675CTCTCTAAGAATCTTTCTCGCTGGAAAATGGAGTCAACCGGTAAAGCGAAGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ccagcgagaaagattcttagagag
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ccagcgagaaagattcttagagag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGCGAGAAAGATTCTTAGAGAG&k=0&no_gap=0&offset=0&limit=50
0.693 | 0.599 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCTAAGAATCTTTCTCGCTGG&k=0&no_gap=0&offset=0&limit=49
0.705 | 0.012 | cgi_end;

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