GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:47:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jmsf27h23, 5' end.
CJ743573.1:9-32
GACGGTTC9CCAGTGTCTTCCCTGCAAAGTGTAGTTCTGTACNTCTAGAGAGAGATAGAGAGA
Ipomoea nil cDNA clone:jmsf52l01, 5' end.
CJ751495.1:9-32
GGCTGTTC9CCAGTGTCTTCCCTGCAAAGTGTAGTTCTGTACATCTAGAGAGAGATAGAGAGA
Ipomoea trifida cultivar NCNSP0306 chromosome 2.
CP025645.1:9582788-9582811
TTTCTATTTCTCTCTCTAGACGTACAGAAC9582788TACACTTTGCAGGGAAGACACTGGGAACAGCAGTGAAGGGGGAGACTTACTAAC
Ipomoea triloba cultivar NCNSP0323 chromosome 2.
CP025661.1:4165933-4165956
TTTCTATTTCTCTCTCTAGACGTACAGAAC4165933TACACTTTGCAGGGAAGACACTGGGAACAGCAGTGAAGGGGGAGACTTACTAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ccagtgtcttccctgcaaagtgta
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ccagtgtcttccctgcaaagtgta | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.155 | 0.147 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGTGTCTTCCCTGCAAAGTGTA&k=0&no_gap=0&offset=0&limit=50
0.175 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=TACACTTTGCAGGGAAGACACTGG&k=0&no_gap=0&offset=0&limit=48
0.177 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).