GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 06:55:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jmsf16o17, 5' end.
CJ739423.1:160-183
TCGCAGCCAAGGCCGACCAAAATTGTACTG160CCAAAGAAGAAGCCAATGAAATGGTCCACCGGGGTGGCACCGGGGGAGTACGGC
sp_c14_19 Sweetpotato cDNA library C Ipomoea batatas cDNA 5', mRNA sequence.
EE878260.1:191-214
TCGCAGCCAAGGCCTACCAAAATTGTACTG191CCAAAGAAGAAGCCAATGAAATGGTCCACCGGGGTGGCGCCGGGGGAGTACGGT
Ipomoea batatas mRNA, clone: IbKAES06D16, unspecified EST, cultivar: Koukei 14.
HX982568.1:194-217
TCGCAGCCAAGGCCGACCAAAATTGTACTG194CCAAAGAAGAAGCCAATGAAATGGTCCACCGGGGTGGCACCGGGGGAGTACGGT
Ipomoea nil mRNA, clone: jm42n09, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY923632.1:170-193
TCGCAGCCAAGGCCGACCAAAATTGTACTG170CCAAAGAAGAAGCCAATGAAATGGTCCACCGGGGTGGCACCGGGGGAGTACGGC
Ipomoea nil mRNA, clone: jm50n19, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY926569.1:211-234
TCGCAGCCAAGGCCGACCAAAATTGTACTG211CCAAAGAAGAAGCCAATGAAATGGTCCACCGGGGTGGCACCGGGGGAGTACGGC
Ipomoea triloba cultivar NCNSP0323 chromosome 1.
CP025660.1:422163-422186
TCGCAGCCAAGGCCGACCAAAATTGTACTG422163CCAAAGAAGAAGCCAATGAAATGGTCCACCGGGGTGGCACCAGGGGAGTACGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ccatttcattggcttcttctttgg
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ccatttcattggcttcttctttgg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CCATTTCATTGGCTTCTTCTTTGG&k=0&no_gap=0&offset=0&limit=50
0.466 | 0.360 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAAGAAGAAGCCAATGAAATGG&k=0&no_gap=0&offset=0&limit=50
0.470 | 0.004 | cgi_end;

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