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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:50:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:14020521-14020540
ACCAATCAAGTATTTTCCCTCATTTTACTC14020521CCCACCAATCAAAAATCACCCTCACTTCTCTCCCCAATCAGATTTCATTC
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:13967105-13967124
ACCAATCAAGTATTTTCCCTCATTTTACTC13967105CCCACCAATCAAAAATCACCCTCACTTCTCTCCCCAATCAGATATCATTC
Ennomos fuscantarius genome assembly, chromosome: 13.
HG992036.1:9660227-9660246
CAATACCCCAAAACCCCACAAACCAAATAG9660227CCCACCAATCAAAAATCACCAATGGCAAAATTAATCTATAATAATAATAA
Ennomos quercinarius genome assembly, chromosome: 6.
OU342494.1:6676829-6676848
GCAAACTTCCCCACTTTTTTGGGGAACTAC6676829CCCACCAATCAAAAATCACCAACGATAAAAAAATCCATGGCCATAATATA
Ennomos quercinarius genome assembly, chromosome: 6.
OU342494.1:7716244-7716263
CCAAACATGCCCCCTTTTTTGGGGAACCAG7716244CCCACCAATCAAAAATCACCGACGGCATAAAAATCCCTGACTATGTAGAA
Ennomos quercinarius genome assembly, chromosome: 12.
OU342500.1:5670138-5670157
TCCCCTTCCCCCCTCTTTGGGGGAAATACC5670138CCCACCAATCAAAAATCACCGAAGACAACAAAAAATGTCTAAATCTGTAG
Ennomos quercinarius genome assembly, chromosome: 25.
OU342513.1:6448338-6448357
GGCTGGGACGCCGCCTTTTTGGGAGAAATG6448338CCCACCAATCAAAAATCACCAACGAGAAAAAAAATCTTTGAAATTGTAAA
Ennomos quercinarius genome assembly, chromosome: 29.
OU342517.1:7073896-7073915
GCAAACTTCCCCCTCTTTTGGGGGAACTAC7073896CCCACCAATCAAAAATCACCCACGAGAAAAAAAACCCTGACTTTGTAGAA
Ennomos quercinarius genome assembly, chromosome: 30.
OU342518.1:764405-764424
TGCAAACTTTCCTTTTTCTGGGGGAAATAC764405CCCACCAATCAAAAATCACCCGCTACAAAAAAATCCTTGAACCTGTAAAA
Operophtera brumata genome assembly, chromosome: 5.
OW052229.1:26783335-26783354
AGCAACTTTCCCGTTTTTAGGGGAACATAC26783335CCCACCAATCAAAAATCACCGAGACAACAAACAAAACTTTGAAACTTTAA
Apocheima hispidaria genome assembly, chromosome: 1.
OX388144.1:14284281-14284300
TGAAGGTCGTGACATTTTTGGGGGAAATAC14284281CCCACCAATCAAAAATCACCGACGACTACATTTTTTTTATGAAATTGTAG
Apocheima hispidaria genome assembly, chromosome: 2.
OX388145.1:2408628-2408647
GCAAATTTCCCCTCTTTTTGGGGGAAATAC2408628CCCACCAATCAAAAATCACCGACGACTAAAAAATTTAAAAAAAAAAATGT
Apocheima hispidaria genome assembly, chromosome: 4.
OX388147.1:15428226-15428245
TCTTGTTGGTGGAAATACCCATGGAAATAA15428226CCCACCAATCAAAAATCACCGACGACTAAATTGTAGAATTGCGGTTGTGC
Apocheima hispidaria genome assembly, chromosome: 5.
OX388148.1:394883-394902
TTCCAACATACATACAGATGAAAGCAATAC394883CCCACCAATCAAAAATCACCGACGACAATAAAATCTATAAAATCGTAGAA
Apocheima hispidaria genome assembly, chromosome: 5.
OX388148.1:4412403-4412422
AGCAAACTTCCCCCTTTTTGGGCGAAATAC4412403CCCACCAATCAAAAATCACCGACGAAAAAAAGTCTGTACTCGAGTACAAC
Apocheima hispidaria genome assembly, chromosome: 5.
OX388148.1:5467110-5467129
GTTCCCGTCCTCTCTTTTTGGAGGAAATAC5467110CCCACCAATCAAAAATCACCGACCACTAAAAAATTCTATGATATTGAAGA
Apocheima hispidaria genome assembly, chromosome: 5.
OX388148.1:7370263-7370282
CGAGCACCAACATACGGTCAGATGCAAAAC7370263CCCACCAATCAAAAATCACCGACGACACAAAAATATATAAAATTTTATAA
Apocheima hispidaria genome assembly, chromosome: 6.
OX388150.1:12654401-12654420
CATACGGACAGATGAAAGCAATAATCAAAC12654401CCCACCAATCAAAAATCACCGACGACAGAAAAATCTATGAAATTGTAGAA
Apocheima hispidaria genome assembly, chromosome: 7.
OX388151.1:1030353-1030372
ACAAACTTCCCCCCTTTTTGGGGGAAATAC1030353CCCACCAATCAAAAATCACCGACGACTAAAAAGTTCTAAACACTTGTAGA
Apocheima hispidaria genome assembly, chromosome: 13.
OX388157.1:6911066-6911085
GCAAACTTCCCTCCTTTTTGGGGGACATAC6911066CCCACCAATCAAAAATCACCGATATCTAAAAAAAAAACTATTAAATTGTA
Apocheima hispidaria genome assembly, chromosome: 16.
OX388160.1:14215886-14215905
GCAAACTTCGCCCTTTTTTGGGGGAAATAT14215886CCCACCAATCAAAAATCACCGACGACTACAACATTCTATAAAATTTGTAG
Apocheima hispidaria genome assembly, chromosome: 17.
OX388161.1:14295352-14295371
CAAACTTCCCATATTTTTGGGGGGAAATAC14295352CCCACCAATCAAAAATCACCGACAACTATTTTTTTTTTATGAAATTGTAG
Apocheima hispidaria genome assembly, chromosome: 19.
OX388163.1:12746434-12746453
ATTTTTAGCCCCTATTTTGGGGGGAAATAT12746434CCCACCAATCAAAAATCACCGACGACTTAAGACTCTGAAAAATTGTAGAA
Apocheima hispidaria genome assembly, chromosome: 21.
OX388165.1:10781632-10781651
AGCAAACTTTCCCCATTTTTGGGAAAATAC10781632CCCACCAATCAAAAATCACCGACGACTAAAAATTCTATAAAATTGTAGAA
Apocheima hispidaria genome assembly, chromosome: 23.
OX388167.1:9150042-9150061
ACAAATTTCCCCCATTTTTGGAAGAAATAC9150042CCCACCAATCAAAAATCACCGACGACAATAAAGTCTAATAAACCTGGTAT
Apocheima hispidaria genome assembly, chromosome: 24.
OX388168.1:9819296-9819315
TGCAAACTTCCCCTCTTTTGGTGGAAATAC9819296CCCACCAATCAAAAATCACCGATGACTAAAACATTCGGAAATGTAATTGT
Apocheima hispidaria genome assembly, chromosome: 25.
OX388169.1:3003375-3003394
GCAGGCGTTCCTTCTTTTTGGGGGAAACAC3003375CCCACCAATCAAAAATCACCGACGACTACAAAATTAAAAAGAAAAACGTA
Idaea dimidiata genome assembly, chromosome: 1.
OX442326.1:5031400-5031419
AGCACTTAGTCCCCTTAGTGGGCAAAATAC5031400CCCACCAATCAAAAATCACCTGCAATCAAAAAACTATAAATTCAAACCAG
Idaea dimidiata genome assembly, chromosome: 5.
OX442331.1:4345302-4345321
GAATTTTTGTATGGAGGGTGGGAGAAATAC4345302CCCACCAATCAAAAATCACCCTCGACTAAAAAATCTATTTGCTCATAAGC
Idaea dimidiata genome assembly, chromosome: 9.
OX442335.1:2807189-2807208
TGATTGATTGATTGATTGTGGGAGAAATAT2807189CCCACCAATCAAAAATCACCCACGACAATAAAAACCCAAGCTCATAGAAC
Idaea dimidiata genome assembly, chromosome: 14.
OX442340.1:15627528-15627547
GAACTTTTGTATGGAGGGTGGAAAAAATAT15627528CCCACCAATCAAAAATCACCCACGACATAAAAAACCATATGCTTTCCATA
Epirrita christyi genome assembly, chromosome: 16.
OX595849.1:9121789-9121808
GCAAACTTTCCCCAGTTTTGTGGGAAATAC9121789CCCACCAATCAAAAATCACCGACGACAAAAAAATTATATGGGTTTGTAGA
Idaea biselata genome assembly, chromosome: 7.
OY292401.1:25200451-25200470
GACCTCGCAAGACCTTAGTGGGAATAATAC25200451CCCACCAATCAAAAATCACCACATCAATAAAAACTATCAACTCAAGTTTC
Idaea biselata genome assembly, chromosome: 11.
OY292405.1:14504791-14504810
AAGTTTTAGCCCCCTTAGTTGGCGAAATAC14504791CCCACCAATCAAAAATCACCCACGACGTTAAAAATCTATTCCTACTTAAT
Ennomos erosarius genome assembly, chromosome: 13.
OY756990.1:8183668-8183687
GCAAACTGCCCCCCTTTTTTTGGGAACTAC8183668CCCACCAATCAAAAATCACCGACGACAAAAAATTCCCTGACCTCAGAACT
Ennomos erosarius genome assembly, chromosome: 15.
OY756992.1:1562265-1562284
GCAAACTTCCCCCCTTTTTTGAGGAACTAC1562265CCCACCAATCAAAAATCACCGATGACGAAAAAATTTCCTGACCTTGTAGC
Ennomos erosarius genome assembly, chromosome: 29.
OY757006.1:557085-557104
TGCCCCCGTTTTTGGGGAACTTATAGGTAC557085CCCACCAATCAAAAATCACCGACGACAAACATTTTTTTTTTGTTTATTAT
JP 2009538603-A/99: Modified Microbial Nucleic Acid.
FV536120.1:1685292-1685311
AGTTAGTGATTATTGTTTTATTATATTGGT1685292GGTGATTTTTGATTGGTGGGATTGTGTAAAATGTGTTTGGTTTATATGTA
JP 2009538603-A/100: Modified Microbial Nucleic Acid.
FV536121.1:1685292-1685311
AGTTAGTGATTATTGTTTTATTATATTGGT1685292GGTGATTTTTGATTGGTGGGATTGTGTAAAATGTGTTTGGTTTATATGTA
JP 2009538603-A/177: Modified Microbial Nucleic Acid.
FV536198.1:5186212-5186231
TTTGTTGGTTGTGTTGATTATGGTGGTGTT5186212GGTGATTTTTGATTGGTGGGTTTAGTTTGTGGTTGTTTTGGTGATTTGGG
JP 2009538603-A/178: Modified Microbial Nucleic Acid.
FV536199.1:5186212-5186231
TTTGTTGGTTGTGTTGATTATGGTGGTGTT5186212GGTGATTTTTGATTGGTGGGTTTAGTTTGTGGTTGTTTTGGTGATTTGGG
JP 2009538603-A/289: Modified Microbial Nucleic Acid.
FV536310.1:3112558-3112577
TGGGATAGTTGTGGGTTTGGTATTTGTTGG3112558GGTGATTTTTGATTGGTGGGTTGTGTATGGTGTTTTTGGTGTTGTTGTGT
JP 2009538603-A/290: Modified Microbial Nucleic Acid.
FV536311.1:3112558-3112577
TGGGATAGTTGTGGGTTTGGTATTTGTTGG3112558GGTGATTTTTGATTGGTGGGTTGTGTATGGTGTTTTTGGTGTTGTTGTGT
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:18459311-18459330
GAATGAAATCTGATTGGGGAGAGAAGTGAG18459311GGTGATTTTTGATTGGTGGGGAGTACAATGAGGGAAAATACTTGATTGGT
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:18273421-18273440
GAATGAAATCTGATTGGGGAGAGAAGTGAG18273421GGTGATTTTTGATTGGTGGGGAGTAAAATGAGGGAAAATACTTGATTGGT
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:17993768-17993787
GAATGAAATCTGATTGGGGAGAGAAGTGAG17993768GGTGATTTTTGATTGGTGGGGAGTAAAATGAGGGAAAATACTTGATTGGT
Malus domestica genome assembly, chromosome: 12.
OU696688.1:18041790-18041809
GAATGATATCTGATTGGGGAGAGAAGTGAG18041790GGTGATTTTTGATTGGTGGGGAGTAAAATGAGGGAAAATACTTGATTGGT
Malus domestica genome assembly, chromosome: 12.
OU744553.1:18045851-18045870
GAATGATATCTGATTGGGGAGAGAAGTGAG18045851GGTGATTTTTGATTGGTGGGGAGTAAAATGAGGGAAAATACTTGATTGGT
Malus domestica genome assembly, chromosome: 12.
OU744964.1:17604445-17604464
GAATGATATCTGATTGGGGAGAGAAGTGAG17604445GGTGATTTTTGATTGGTGGGGAGTAAAATGAGGGAAAATACTTGATTGGT
Malus domestica genome assembly, chromosome: 12.
OU745002.1:17769759-17769778
GAATGATATCTGATTGGGGAGAGAAGTGAG17769759GGTGATTTTTGATTGGTGGGGAGTAAAATGAGGGAAAATACTTGATTGGT
Geum urbanum genome assembly, chromosome: 15.
OX327011.1:45322418-45322437
TATATTATTTTTGTGAGTTGTTGTTAGCTT45322418GGTGATTTTTGATTGGTGGGTTTGGTTGTGAAATGGGAGTAAATTTATTT
Ennomos fuscantarius genome assembly, chromosome: 4.
HG992027.1:8955671-8955690
GGTTCTACAGGTTCAGGGTTTTTTATTATT8955671GGTGATTTTTGATTGGTGGGGTTAGTCCCCAAGAACATTTGCTATCATGT
Ennomos quercinarius genome assembly, chromosome: Z.
OU342489.1:6697384-6697403
CGAACGAAATGAGCAAAAGTCTATGTCGTC6697384GGTGATTTTTGATTGGTGGGGTAGTTCTCCCAAAAAGGGGGGAAGTTTGC
Ennomos quercinarius genome assembly, chromosome: 18.
OU342506.1:1950812-1950831
ATTTTACAAGTTAAGATTTTATTTTCTGTT1950812GGTGATTTTTGATTGGTGGGGTAGTTCTCCCAAATATTGGGAAAGTCGGG
Ennomos quercinarius genome assembly, chromosome: 25.
OU342513.1:9631012-9631031
GTTCTGCAAGATCAGGGTTTTTTAGTCGGC9631012GGTGATTTTTGATTGGTGGGGTAGTTCCTCTGAAAATTGAGAAGTTTTGT
Operophtera brumata genome assembly, chromosome: 2.
OW052226.1:47768439-47768458
TCTAAAATTTAATAGAATTTTATTTTCGTC47768439GGTGATTTTTGATTGGTGGGGTACTTTCTCTCAAAACGGGGGAAGTTTGC
Operophtera brumata genome assembly, chromosome: 3.
OW052227.1:46566584-46566603
GTTCTACAATGTCACAGTTTTTTTTTCGTC46566584GGTGATTTTTGATTGGTGGGTATTTTCCCCAAAAAAGGGGGAAGTTTGCT
Operophtera brumata genome assembly, chromosome: Z.
OW052239.1:77737733-77737752
TTCATTCATTCATAGTTTTGTTTTATCATC77737733GGTGATTTTTGATTGGTGGGGTGGGGTATGTCCCCCAAAAGGGGGGAAGT
Apocheima hispidaria genome assembly, chromosome: 1.
OX388144.1:15835409-15835428
CAATCGCAATTCTATAATTTCATAGCCATC15835409GGTGATTTTTGATTGGTGGGCTAGTTCCCCCCAAAATAGGGGATTTCATT
Apocheima hispidaria genome assembly, chromosome: 2.
OX388145.1:16234093-16234112
TCAATAATTTTATAGAGTTTTCTATTAACC16234093GGTGATTTTTGATTGGTGGGATATTTCCCCCAAAAAGGGGGGAAGTTTGC
Apocheima hispidaria genome assembly, chromosome: 5.
OX388148.1:11469661-11469680
TCTATAATTTTATAGAATTCTTTAGTCGTT11469661GGTGATTTTTGATTGGTGGGATATTTCTCCCACAAAGGGTGAAGTTTGCT
Apocheima hispidaria genome assembly, chromosome: 5.
OX388148.1:16945412-16945431
TCTACAATTTCATAGAATATTTTAGTCGTT16945412GGTGATTTTTGATTGGTGGGGTATTCCCCCCTAAATAGGGCAAGTTTGCT
Apocheima hispidaria genome assembly, chromosome: 6.
OX388150.1:7495178-7495197
TACGATATTTTTTTTAATTGTTTGGTTGTC7495178GGTGATTTTTGATTGGTGGGGTATTTCCCTCAAAAAGGAGGGAAATTTGC
Apocheima hispidaria genome assembly, chromosome: 6.
OX388150.1:10266038-10266057
TACCATTTTTATCAGATTTTTTTAGCCGTC10266038GGTGATTTTTGATTGGTGGGGTATTCCACCCAAAAAGGAAGTTTGCTGCG
Apocheima hispidaria genome assembly, chromosome: 6.
OX388150.1:12394384-12394403
CTATAAATTTTTTAGAATGTTTTAATCGTC12394384GGTGATTTTTGATTGGTGGGGTATTTTCCCCAAAAAAGGAAGTTTGCAGC
Apocheima hispidaria genome assembly, chromosome: 7.
OX388151.1:1948009-1948028
TCAACAATTTAATAGACTTTTTTAAGCTTC1948009GGTGATTTTTGATTGGTGGGGTATTTCCCCCAAAAAGAGCTTCGCTCACT
Apocheima hispidaria genome assembly, chromosome: 8.
OX388152.1:246566-246585
TTCTACAACTTTGTAAATTTTTGAATCGTC246566GGTGATTTTTGATTGGTGGGGTATTTCTCCCAATAATGCGGGAAGTTCAC
Apocheima hispidaria genome assembly, chromosome: 9.
OX388153.1:4933908-4933927
CTGCATTTTTTTTTAAATTTTTTAGTCGTC4933908GGTGATTTTTGATTGGTGGGGTATTTCCCCCAAAAAGGGGGCAAGTTTGC
Apocheima hispidaria genome assembly, chromosome: 10.
OX388154.1:1064178-1064197
TTCTACGATTTTTTAGAATTTTTAGTTGTC1064178GGTGATTTTTGATTGGTGGGGTATGTTCCCCAGAAAGGGAGGAACTTTGC
Apocheima hispidaria genome assembly, chromosome: 12.
OX388156.1:8448768-8448787
CTACAATTTTATCAGAACTTTTAAGTCGTC8448768GGTGATTTTTGATTGGTGGGGTATTTCCCCCAAAAAGAGGGAAAGTTTGC
Apocheima hispidaria genome assembly, chromosome: 14.
OX388158.1:1658662-1658681
TGCTATGCAACATTATATTTTTTTGTTGCC1658662GGTGATTTTTGATTGGTGGGGTATTTTCACCAAATAGAGGGAAGCTTGTT
Ennomos erosarius genome assembly, chromosome: 26.
OY757003.1:8988599-8988618
TCTGCGAGGTCAGAGTTTTTTTTTACCATT8988599GGTGATTTTTGATTGGTGGGGTGGTTTCCTAAAAAAGGGGGGAAGTTTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/cccaccaatcaaaaatcacc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : cccaccaatcaaaaatcacc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.393 | 0.384 | search_plus_done; http://172.18.8.135:50400/match?q=CCCACCAATCAAAAATCACC&k=0&no_gap=0&offset=0&limit=50
0.688 | 0.295 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGATTTTTGATTGGTGGG&k=0&no_gap=0&offset=0&limit=13
0.712 | 0.023 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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