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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:09:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Podarcis cretensis genome assembly, chromosome: 5.
OX638153.1:13550460-13550479
CATTGTTTACTTTATTATATCTGTCGACTG13550460CCCTTCATTCACATTTCCAGGGTGGTTTATAGGAATAAATAATAAGAATA
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:18628104-18628123
CATTCTCCCTCACTTGTACGTAACCCCACT18628104CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:18701274-18701293
CATTCTCCCTCACTTATACGTAACCCCACT18701274CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:18510041-18510060
CATTCCCCCTCACTTATACGTAACCCCACT18510041CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143386.1:17018629-17018648
CATTCTCCCTCACTTATACGTAACCCCACT17018629CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:18248276-18248295
CATTCCCCCTCACTTATACGTAACCCCACT18248276CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus domestica genome assembly, chromosome: 12.
OU696688.1:18277049-18277068
CATTCCCCCTCACTTATACGTAACCCCACT18277049CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus domestica genome assembly, chromosome: 12.
OU744553.1:18316699-18316718
CATTCCCCCTCACTTATACGTAACCCCACT18316699CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus domestica genome assembly, chromosome: 12.
OU744964.1:17880379-17880398
CATTCCCCCTCACTTATACGTAACCCCACT17880379CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Malus domestica genome assembly, chromosome: 12.
OU745002.1:18059073-18059092
CATTCCCCCTCACTTATACGTAACCCCACT18059073CCCTTCATTCACATTTCCAGCTATTTTTCCTCCCCTGCCAAGCAAAATCT
Polyommatus iphigenia genome assembly, chromosome: 8.
OY730185.1:28712887-28712906
TCCAACCGAAACTGTTTCACTATTCTTACG28712887CCCTTCATTCACATTTCCAGGTATCGGCTTTGGTATGATCTACCTGCCGT
Podarcis lilfordi genome assembly, chromosome: 5.
OX395130.1:13883351-13883370
TATTCTTATTATTTATTCCTATAAACCACC13883351CTGGAAATGTGAATGAAGGGCAGTCAACAAATATAATAAAGTAAACAATG
Zootoca vivipara genome assembly, chromosome: 5.
OY735906.1:87156903-87156922
AATTATTATTATTTATTCCTATAAACCACC87156903CTGGAAATGTGAATGAAGGGCAGTTGACAAATATAATAAAGTAAACAATG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:13561983-13562002
AGATTTTGCTTGGCAGGGGAGGAAAAATAG13561983CTGGAAATGTGAATGAAGGGAGTGGGGTTACGTATAAGTGAGGGAGAATG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:13747714-13747733
AGATTTTGCTTGGCAGGGGAGGAAAAATAG13747714CTGGAAATGTGAATGAAGGGAGTGGGGTTACGTATAAGTGAGGGAGAATG
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:13731839-13731858
AGATTTTGCTTGGCAGGGGAGGAAAAATAG13731839CTGGAAATGTGAATGAAGGGAGTGGGGTTACGTATAAGTGAGGGGGAATG
Pyrus communis genome assembly, chromosome: 9.
OY757076.1:10258697-10258716
AGATTTTGCTTGGCAGGAAAGGAAAAATAG10258697CTGGAAATGTGAATGAAGGGAGTGGGGTATGAGGGAGAATGATGGGGTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/cccttcattcacatttccag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : cccttcattcacatttccag | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.352 | 0.344 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTTCATTCACATTTCCAG&k=0&no_gap=0&offset=0&limit=50
0.466 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=CTGGAAATGTGAATGAAGGG&k=0&no_gap=0&offset=0&limit=39
0.470 | 0.004 | cgi_end;

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