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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:17:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BoT01-162C6-R BOTO1 Brassica oleracea genomic clone 162C6, genomic survey sequence.
KG699578.1:9-26
AAGCTTCA9CGTATAGAGCCTCACGATCAGACTTCTTGGCGTCATTGGCAACTTCAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002B23, complete sequence.
AC232437.1:72414-72431
TGGAAGCCAATGTTGAGGTCAAAAGCTTCA72414CGTATAGAGCCTCACGATCAGACTTCTTGGCGTCATTAGCAACTTCAG
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:965869-965886
TGGAAGCCAATGTTGAGGTCAAAAGCTTCA965869CGTATAGAGCCTCACGATCAGACTTCTTGGCGTCATTGGCAACTTCAG
Cardamine chenopodiifolia genome assembly, chromosome: 9.
OZ000467.1:795957-795974
TAGAGGCCAATGTCGAGGTCAAGAGCTTCA795957CGTATAGAGCCTCACGATCAAACTTCTTGGCATCATTGGCAACTTCAG
Sthenelais limicola genome assembly, chromosome: 3.
OW804096.1:125742390-125742407
CCCACTTCCCTTCCAGTAGAGGAAGGTTTC125742390CGTATAGAGCCTCACGATCTCGGCAGTCCCGATCAAAAAAAATATTGA
Eulemur macaco macaco clone CH273-379M21, WORKING DRAFT SEQUENCE, 6 ordered pieces.
AC203495.3:91069-91086
CCTATTTTTTATTATAAACAATATGTGTTC91069ATCGTGAGGCTCTATACGCTAAATAGGTACAACTTTTTGTCAATCATA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB017P15, complete sequence.
AC189246.2:116357-116374
CTGAAGTTGCTAATGACGCCAAGAAGTCTG116357ATCGTGAGGCTCTATACGTGAAGCTTTTGACCTCAACATTGGCTTCCA
Verticillium nonalfalfae strain WCS 072 chromosome 8.
CP069144.1:275645-275662
ATGGCTTCTCGTTTCCTCAGAACCTGAAAT275645ATCGTGAGGCTCTATACGAAGTCACGCTGAACAGGTCATCGATGGAGG
Verticillium nonalfalfae strain CBS 382.66 chromosome 3.
CP069148.1:273479-273496
ATGGCTTCTCGTTTCCTCAGAACCTGAAAT273479ATCGTGAGGCTCTATACGAAGTCACGCTGAACAGGTCATCGATGGAGG
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:68737611-68737628
CTGAAGTTGCTAATGACGCCAAGAAGTCTG68737611ATCGTGAGGCTCTATACGTGAAGCTTTTGACCTCAACATTGGCTTCCA
Brassica napus genome assembly, chromosome: A09.
HG994363.1:52691423-52691440
CTGAAGTTGCTAATGACGCCAAGAAGTCTG52691423ATCGTGAGGCTCTATACGTGAAGCTTTTGACCTCAACATTGGCTTCCA
Brassica napus genome assembly, chromosome: C08.
HG994372.1:40715623-40715640
CTGAAGTTGCCAATGACGCCAAGAAGTCTG40715623ATCGTGAGGCTCTATACGTGAAGCTTTTGACCTCAACATTGGCTTCCA
Brassica rapa genome, scaffold: A09.
LR031568.1:56758286-56758303
CTGAAGTTGCTAATGACGCCAAGAAGTCTG56758286ATCGTGAGGCTCTATACGTGAAGCTTTTGACCTCAACATTGGCTTCCA
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:67282353-67282370
CTGAAGTTGCTAATGACGCCAAGAAGTCTG67282353ATCGTGAGGCTCTATACGTGAAGCTTTTGACCTCAACATTGGCTTCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/cgtatagagcctcacgat
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : cgtatagagcctcacgat | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.244 | 0.235 | search_plus_done; http://172.18.8.135:50400/match?q=CGTATAGAGCCTCACGAT&k=0&no_gap=0&offset=0&limit=50
0.340 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=ATCGTGAGGCTCTATACG&k=0&no_gap=0&offset=0&limit=45
0.346 | 0.006 | cgi_end;

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