GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-21 01:31:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sylvilagus floridanus genome assembly, chromosome: 1.
OX463223.1:61186896-61186915
CCAACTGTACTATATGCCATGCAACCTTCC61186896TGGAGACATGCAGAATGGAGTCCCTATAAAGGAGTTGATCTTAAGAGATG
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:1956812-1956831
ATAATAGAAAGAACTTCAGTGTGAAATAAA1956812TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:2359130-2359149
ATAATAGAAAGAACTTCAGTGTGAAATATA2359130TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:2143308-2143327
ATAATAGAAAGAACTTCAGTGTGAAATATA2143308TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:2630294-2630313
ATAATAGAAAGAACTTCAGTGTGAAATATA2630294TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:2369626-2369645
ATAATAGAAAGAACTTCAGTGTGAAATATA2369626TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143390.1:1982389-1982408
ATAATAGAAAGAACTTCAGTGTGAAATATA1982389TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGATAGAGAG
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:2167258-2167277
ATAATAGAAAGAACTTCAGTGTGAAATATA2167258TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 16.
OU696692.1:2370111-2370130
ATAATAGAAAGAACTTCAGTGTGAAATATA2370111TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 16.
OU744557.1:2373251-2373270
ATAATAGAAAGAACTTCAGTGTGAAATATA2373251TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 16.
OU744968.1:2369708-2369727
ATAATAGAAAGAACTTCAGTGTGAAATATA2369708TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 16.
OU745006.1:2380344-2380363
ATAATAGAAAGAACTTCAGTGTGAAATATA2380344TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus x robusta genome assembly, chromosome: 3.
OY720327.1:2748688-2748707
ATAATAGAAAGAACTTCAGTGTGAAATATA2748688TGGAGACATGCAGAATGGAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAG
Meconema thalassinum genome assembly, chromosome: 7.
OX336395.1:106503077-106503096
CGCATAAACTGGGCGGAGGAGCATCGTGGG106503077TGGAGACATGCAGAATGGAGCTCAGTTCTGTTTTCTGATGAGTCGTGATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ctccattctgcatgtctcca
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ctccattctgcatgtctcca | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.126 | 0.116 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCATTCTGCATGTCTCCA&k=0&no_gap=0&offset=0&limit=50
0.158 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGACATGCAGAATGGAG&k=0&no_gap=0&offset=0&limit=50
0.167 | 0.010 | cgi_end;

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