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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 08:06:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Pyrus x bretschneideri Unigene43152_XinShao mRNA sequence.
JR634532.1:122-141
CATTGGCAAATCTTTCCAACTCCTAATAGT122CTCCGCCGCTATAACACTTCCCCACTGCATTCCTCCAGAGTAATTTAGAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:37652900-37652919
CATTGGCAGATCTTTCCAACTCCTAATAGT37652900CTCCGCCGCTATAACACTTCCCAACTGCTTTCTAAAGGAACCAAACAAAC
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:40879779-40879798
CATTGGCAGATCTTTCCAACTCCTAATAGT40879779CTCCGCCGCTATAACACTTCCCAACTGCTTTCTAAAGGAACCAAACAAAC
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:36818089-36818108
CATTGGCAGATCTTTCCAACTCCTAATAGT36818089CTCCGCCGCTATAACACTTCCCAACTGCTTTCTAAAGGAACCAAACAAAC
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:37908599-37908618
CATTGGCAGATCTTTCCAACTCCTAATAGT37908599CTCCGCCGCTATAACACTTCCCAACTGCTTTCTAAAGGAACCAAACAAAC
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:37156863-37156882
CATTGGCAGATCTTTCCAACTCCTAATAAT37156863CTCCGCCGCTATAACACTTCCCAACTGCTTTCTAAAGGAACCAAACAAAC
TSA: Pyrus pyrifolia mRNA, contig: contig_30338.
FX404256.1:597-616
TTCTAAATTACTCTGGAGGAATGCAGTTGG597GAAGTGTTATAGCGGCGGAGACTATTAGGAGTTGGAAAGATTTGCCAATG
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:13850376-13850395
GTTTGTTTGGTTCCTTTAGAATGCAGTTGG13850376GAAGTGTTATAGCGGCGGAGACTATTAGGAGTTGGAAAGATCTGCCAATG
Malus domestica genome assembly, chromosome: 15.
OU696691.1:15591276-15591295
GTTTGTTTGGTTCCTTTAGAAAGCAGTTGG15591276GAAGTGTTATAGCGGCGGAGACTATTAGGAGTTGGAAAGATCTGCCAATG
Malus domestica genome assembly, chromosome: 15.
OU744556.1:15520278-15520297
GTTTGTTTGGTTCCTTTAGAAAGCAGTTGG15520278GAAGTGTTATAGCGGCGGAGACTATTAGGAGTTGGAAAGATCTGCCAATG
Malus domestica genome assembly, chromosome: 15.
OU744967.1:15497955-15497974
GTTTGTTTGGTTCCTTTAGAAAGCAGTTGG15497955GAAGTGTTATAGCGGCGGAGACTATTAGGAGTTGGAAAGATCTGCCAATG
Malus domestica genome assembly, chromosome: 15.
OU745005.1:15438632-15438651
GTTTGTTTGGTTCCTTTAGAAAGCAGTTGG15438632GAAGTGTTATAGCGGCGGAGACTATTAGGAGTTGGAAAGATCTGCCAATG
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:12619363-12619382
GTTTGTTTGGTTCCTTTAGAATGCAGTTGG12619363GAAGTGTTATAGCGGCGGAGACTATTAGGAGTTGGAAAGATTTGCCAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ctccgccgctataacacttc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ctccgccgctataacacttc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.366 | 0.357 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCGCCGCTATAACACTTC&k=0&no_gap=0&offset=0&limit=50
0.468 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGTGTTATAGCGGCGGAG&k=0&no_gap=0&offset=0&limit=44
0.473 | 0.005 | cgi_end;

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