GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 16:37:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil mRNA, clone: jm44h04, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY924230.1:315-338
GACTAACGGCATTTTCTTCACCCTCTTCTT315CTCCGTTGCCTACTACCTTCTCCACCGCTGGCGCGACAAGATCCGCAATTCTAC
Ipomoea nil mRNA, clone: JMFS035E06, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY938618.1:306-329
GACTAACGGCATTTTCTTCACCCTCTTCTT306CTCCGTTGCCTACTACCTTCTCCACCGCTGGCGCGACAAGATCCGCAATTCTAC
Ipomoea nil mRNA, clone: JMFS081H10, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY942299.1:246-269
GACTAACGGCATTTTCTTCACCCTCTTCTT246CTCCGTTGCCTACTACCTTCTCCACCGCTGGCGCGACAAGATCCGCAATTCTAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ctccgttgcctactaccttctcca
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ctccgttgcctactaccttctcca | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.336 | 0.327 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCGTTGCCTACTACCTTCTCCA&k=0&no_gap=0&offset=0&limit=50
0.352 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGAAGGTAGTAGGCAACGGAG&k=0&no_gap=0&offset=0&limit=47
0.352 | 0.000 | cgi_end;

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