GGGenome | Results

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2025-04-07 23:25:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

KS01056H08 KS01 Capsicum annuum cDNA, mRNA sequence.
BM063562.1:123-146

ACAAGAATGCCGCGATAATGTAATCAGCTG123CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS14031F08 KS14 Capsicum annuum cDNA, mRNA sequence.
GD060320.1:266-289

ACAAGAATGCCGCGATAATGTAATCAGCTG266CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS17008E02 KS17 Capsicum annuum cDNA, mRNA sequence.
GD076227.1:259-282

ACAAGAATGCCGCGATAATGTAATCAGCTG259CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS17027F05 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078041.1:271-294

ACAAGAATGCCGCGATAATGTAATCAGCTG271CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS20029C10 KS20 Capsicum annuum cDNA, mRNA sequence.
GD095984.1:264-287

ACAAGAATGCCGCGATAATGTAATCAGCTG264CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS21062C24 KS21 Capsicum annuum cDNA, mRNA sequence.
GD104711.1:264-287

ACAAGAATGCCGCGATAATGTAATCAGCTG264CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGGTTGGAAGGACCCT

KS22001F04 KS22 Capsicum annuum cDNA, mRNA sequence.
GD105119.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS22006C02 KS22 Capsicum annuum cDNA, mRNA sequence.
GD105551.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS22020C12 KS22 Capsicum annuum cDNA, mRNA sequence.
GD106863.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS22041A01 KS22 Capsicum annuum cDNA, mRNA sequence.
GD108776.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS22046E02 KS22 Capsicum annuum cDNA, mRNA sequence.
GD109287.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS22051B02 KS22 Capsicum annuum cDNA, mRNA sequence.
GD109722.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS22054E06 KS22 Capsicum annuum cDNA, mRNA sequence.
GD110044.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS22060F04 KS22 Capsicum annuum cDNA, mRNA sequence.
GD110611.1:262-285

ACAAGAATGCCGCGATAATGTAATCAGCTG262CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS23030G08 KS23 Capsicum annuum cDNA, mRNA sequence.
GD113832.1:273-296

ACAAGAATGCCGCGATAATGTAATCAGCTG273CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS23045A07 KS23 Capsicum annuum cDNA, mRNA sequence.
GD115179.1:271-294

ACAAGAATGCCGCGATAATGTAATCAGCTG271CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS24010B01 KS24 Capsicum annuum cDNA, mRNA sequence.
GD118782.1:260-283

ACAAGAATGCCGCGATAATGTAATCAGCTG260CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS24023H07 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120073.1:266-289

ACAAGAATGCCGCGATAATGTAATCAGCTG266CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS24029B11 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120562.1:161-184

ACAAGAATGCCGCGATAATGTAATCAGCTG161CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS24029D02 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120577.1:264-287

ACAAGAATGCCGCGATAATGTAATCAGCTG264CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS24033H01 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120989.1:274-297

ACAAGAATGCCGCGATAATGTAATCAGCTG274CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS24060G01 KS24 Capsicum annuum cDNA, mRNA sequence.
GD123492.1:264-287

ACAAGAATGCCGCGATAATGTAATCAGCTG264CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGGAAGGACCCC

KS25043L15 KS25 Capsicum annuum cDNA, mRNA sequence.
GD127707.1:220-243

ACAAGAATGCCGCGATAATGTAATCAGCTG220CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KS25047B19 KS25 Capsicum annuum cDNA, mRNA sequence.
GD128023.1:266-289

ACAAGAATGCCGCGATAATGTAATCAGCTG266CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

CS01019F05 Hotpepper under oxidative stress Capsicum annuum cDNA 5', mRNA sequence.
GO344818.1:295-318

ACAAGAATGCCGCGATAATGTAATCAGCTG295CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

TSA: Capsicum annuum MGMT_Contig10167, mRNA sequence.
JW060411.1:798-821

ACAAGAATGCCGCGATAATGTAATCAGCTG798CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCAGGCTTGTAAGGACCCT

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:286847098-286847121

ACAAGAATGCCGCGATAATGTAATCAGCTG286847098CTGTCAGTTTCTATTCCCCTCAGTACCTGTAGTGAGCTGGCTTGTAAGGACCCT

KR 1020160038243-A/16: Single nucleotide polymorphism marker set for marker-assisted breeding in Capsicum and uses thereof.
LG144723.1:181-204

AGGGTCCTTACAAGCCAGCTCACTACAGGT181ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

Sequence 7718 from patent US 10760088.
MV637457.1:1555-1578

AGGGTCCTTACAAGCCAGCTCACTACAGGT1555ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

Sequence 7718 from patent US 11111499.
MY429340.1:1555-1578

AGGGTCCTTACAAGCCAGCTCACTACAGGT1555ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

KS10032G05 KS10 Capsicum annuum cDNA, mRNA sequence.
CA519921.1:434-457

AGGGTCCTTACAAGCCAGCTCACTACAGGT434ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

KS15052B09 KS15 Capsicum annuum cDNA, mRNA sequence.
GD068259.1:438-461

AGGGTCCTTACAAGCCAGCTCACTACAGGT438ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

KS17042B03 KS17 Capsicum annuum cDNA, mRNA sequence.
GD079401.1:482-505

AGGGTCCTTACAAGCCAGCTCACTACAGGT482ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

KS17056C05 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080732.1:671-694

AGGGTCCTTACAAGCCAGCTCACTACAGGT671ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCT

KS19051F07 KS19 Capsicum annuum cDNA, mRNA sequence.
GD092039.1:530-553

AGGGTCCTTACAAGCCAGCTCACTACAGGT530ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

KS22059A07 KS22 Capsicum annuum cDNA, mRNA sequence.
GD110463.1:518-541

AGGGTCCTTACAAGCCAGCTCACTACAGGT518ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

KS25023B03 KS25 Capsicum annuum cDNA, mRNA sequence.
GD125868.1:587-610

AGGGTCCTTACAAGCCAGCTCACTACAGGT587ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

EST0005 Reverse SSH library of ChiLCV inoculated chilli Capsicum annuum cDNA clone EST0005 similar to Adenosylhomocysteinase, mRNA sequence.
JZ979447.1:1-24

1ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

TSA: Capsicum annuum MGMT_Contig44150 mRNA sequence.
JW094394.1:1557-1580

AGGGTCCTTACAAGCCAGCTCACTACAGGT1557ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:5255871-5255894

AGGGTCCTTACAAGCCAGCTCACTACAGGT5255871ACTGAGGGGAATAGAAACTGACAGCAGCTGATTACATTATCGCGGCATTCTTGT

Data Export:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ctgtcagtttctattcccctcagt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ctgtcagtttctattcccctcagt | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.679 | 1.670 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTCAGTTTCTATTCCCCTCAGT&k=0&no_gap=0&offset=0&limit=50
2.378 | 0.699 | search_minus_done; http://172.18.8.135:50400/match?q=ACTGAGGGGAATAGAAACTGACAG&k=0&no_gap=0&offset=0&limit=23
2.387 | 0.009 | cgi_end;

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