GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:32:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

BOHPA67TF BOHP Brassica oleracea genomic clone BOHPA67, genomic survey sequence.
BH571553.1:563-586
ATAACATTTCTTTCCCAAGTCATTAAGAAT563CTTAAGAGGCTTGACATGCGTCAGTTAACAGTAGATTAGAGAGAACGTAGATGG
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:69184180-69184203
TATAACATTTCTTTCCAAAGTCATTAGAAT69184180CTTAAGAGGCTTGACATGCGTCAGTTAACAGTAGATTAGAGAGAACGTAGATGG
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50533887-50533910
TATAACTTTTCTTTCCAAAGTCATTAGAAT50533887CTTAAGAGGCTTGACATGCGTCAGTTAACAGTAGATTAGAGAGAACGTAGATGG
BOT01-6D7TR BOT01 Brassica oleracea genomic clone BOT01-6D7, genomic survey sequence.
FI689253.1:365-388
CCATCTACGTTCTCTCTAATCTACTGTTAA365CTGACGCATGTCAAGCCTCTTAAGATTCTTAATGACTTTGGAAAGAAATGTTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cttaagaggcttgacatgcgtcag
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cttaagaggcttgacatgcgtcag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=CTTAAGAGGCTTGACATGCGTCAG&k=0&no_gap=0&offset=0&limit=50
0.180 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=CTGACGCATGTCAAGCCTCTTAAG&k=0&no_gap=0&offset=0&limit=47
0.181 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).