GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 10:36:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jm34f03, 5' end, single read.
BJ561594.1:163-186
GTCGGTANTGGCGGCAGAGTCATCATCATC163GCACTCGGAAACGGAATCAATAAGTAGCTACTCATCATTATCTCCGTCTTCTTC
Ipomoea nil cDNA clone:jmsf30d07, 5' end.
CJ744898.1:159-182
GTCGGTAATGGCGGCAGAGTCATCATCATC159GCACTCGGAAACGGAATCAATAAGTAGCTACTCATCATTATCTCCGTCTTCTTC
Ipomoea nil cDNA clone:jmsf30e23, 5' end.
CJ744934.1:164-187
GTCGGTAATGGCGGCAGAGTCATCATCATC164GCACTCGGAAACGGAATCAATAAGGAGCTACTCATCATTATCTCCGTCTTCTTC
Ipomoea triloba cultivar NCNSP0323 chromosome 1.
CP025660.1:11394751-11394774
GTCGGTAATGGCGGCAGAGTCATCATCATC11394751GCACTCGGAAACGGAATCAATAAGTAGCTACTCATCATCATTATCTCCGTTTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cttattgattccgtttccgagtgc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cttattgattccgtttccgagtgc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.157 | 0.147 | search_plus_done; http://172.18.8.135:50400/match?q=CTTATTGATTCCGTTTCCGAGTGC&k=0&no_gap=0&offset=0&limit=50
0.340 | 0.184 | search_minus_done; http://172.18.8.135:50400/match?q=GCACTCGGAAACGGAATCAATAAG&k=0&no_gap=0&offset=0&limit=50
0.343 | 0.003 | cgi_end;

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