GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 10:39:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig5329, mRNA sequence.
JW055573.1:578-601
CTTCGGGGCACAAGCAGGAAACAGAGGATT578CTTCTTTACTTCTCCTAGACCCGAGCCTATTACCAAAACCGCCATATCTAGATT
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:28857551-28857574
CTTCGGGGCACAAGCAGGAAACAGAGGATT28857551CTTCTTTACTTCTCCTAGACCCGAGCCTATTACCAAAACCGCCATATCTAGATT
KS16035H07 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072770.1:395-418
AATCTAGATATGGCGGTTTTGGTAATAGGC395TCGGGTCTAGGAGAAGTAAAGAAGAATCCTCTGTTTCCTGCTTGTGCCCCGAAG
KS26026D02 KS26 Capsicum annuum cDNA, mRNA sequence.
GD132046.1:632-655
AATCTAGATATGGCGGTTTTGGTAATAGGC632TCGGGTCTAGGAGAAGTAAAGAAGAATCCTCTGTTTCCTGCTTGTGCCCCGAAG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:263786141-263786164
AATCTAGATATGGCGGTTTTGGTAATAGGC263786141TCGGGTCTAGGAGAAGTAAAGAAGAATCCTCTGTTTCCTGCTTGTGCCCCGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cttctttacttctcctagacccga
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cttctttacttctcctagacccga | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCTTTACTTCTCCTAGACCCGA&k=0&no_gap=0&offset=0&limit=50
0.423 | 0.312 | search_minus_done; http://172.18.8.135:50400/match?q=TCGGGTCTAGGAGAAGTAAAGAAG&k=0&no_gap=0&offset=0&limit=48
0.425 | 0.002 | cgi_end;

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