GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:52:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arvicola amphibius genome assembly, chromosome: 7.
LR862386.1:43200681-43200700
CATCTCCAGCTTCCTGAGCCTGCGAGAATT43200681CTTGGACACATGCCATATCCTGCGGCTCACCAAGCAGGCCACCATCCTTC
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0696B17, *** SEQUENCING IN PROGRESS ***, 79 unordered pieces.
AC260109.1:2327-2346
GAAAAAAAACTCTATGGTTATCTTGTAAAG2327CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0381O20, *** SEQUENCING IN PROGRESS ***, 39 unordered pieces.
AC269417.1:83829-83848
GAAAAAAAACTCTATGGTTATCTTGTAAAG83829CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR722621.1:37075466-37075485
GAAAAAAAACTCTATGGTTATCTTGTAAAG37075466CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR812975.1:37075466-37075485
GAAAAAAAACTCTATGGTTATCTTGTAAAG37075466CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR824637.1:35654282-35654301
GAAAAAAAACTCTATGGTTATCTTGTAAAG35654282CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828092.1:36387017-36387036
GAAAAAAAACTCTATGGTTATCTTGTAAAG36387017CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828099.1:34108157-34108176
GAAAAAAAACTCTATGGTTATCTTGTAAAG34108157CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828106.2:37454470-37454489
GAAAAAAAACTCTATGGTTATCTTGTAAAG37454470CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828120.1:33459168-33459187
GAAAAAAAACTCTATGGTTATCTTGTAAAG33459168CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828158.1:29815320-29815339
GAAAAAAAACTCTATGGTTATCTTGTAAAG29815320CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828172.1:34069885-34069904
GAAAAAAAACTCTATGGTTATCTTGTAAAG34069885CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828179.1:35075322-35075341
GAAAAAAAACTCTATGGTTATCTTGTAAAG35075322CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828193.1:35748996-35749015
GAAAAAAAACTCTATGGTTATCTTGTAAAG35748996CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828271.1:34970962-34970981
GAAAAAAAACTCTATGGTTATCTTGTAAAG34970962CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR865400.1:33449191-33449210
GAAAAAAAACTCTATGGTTATCTTGTAAAG33449191CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR890101.1:37812592-37812611
GAAAAAAAACTCTATGGTTATCTTGTAAAG37812592CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OU015686.1:32733796-32733815
GAAAAAAAACTCTATGGTTATCTTGTAAAG32733796CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OU701468.1:29878758-29878777
GAAAAAAAACTCTATGGTTATCTTGTAAAG29878758CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459907.1:36339815-36339834
GAAAAAAAACTCTATGGTTATCTTGTAAAG36339815CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX459914.1:39853148-39853167
GAAAAAAAACTCTATGGTTATCTTGTAAAG39853148CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX459921.1:36599780-36599799
GAAAAAAAACTCTATGGTTATCTTGTAAAG36599780CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX459975.1:41520050-41520069
GAAAAAAAACTCTATGGTTATCTTGTAAAG41520050CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459982.1:36501508-36501527
GAAAAAAAACTCTATGGTTATCTTGTAAAG36501508CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX459989.1:37188207-37188226
GAAAAAAAACTCTATGGTTATCTTGTAAAG37188207CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX460003.1:39038146-39038165
GAAAAAAAACTCTATGGTTATCTTGTAAAG39038146CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460010.1:38241873-38241892
GAAAAAAAACTCTATGGTTATCTTGTAAAG38241873CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460031.1:37217778-37217797
GAAAAAAAACTCTATGGTTATCTTGTAAAG37217778CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX460038.1:37563638-37563657
GAAAAAAAACTCTATGGTTATCTTGTAAAG37563638CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460045.1:36325360-36325379
GAAAAAAAACTCTATGGTTATCTTGTAAAG36325360CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460052.1:39031821-39031840
GAAAAAAAACTCTATGGTTATCTTGTAAAG39031821CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460059.1:40100320-40100339
GAAAAAAAACTCTATGGTTATCTTGTAAAG40100320CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460065.1:36269118-36269137
GAAAAAAAACTCTATGGTTATCTTGTAAAG36269118CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460080.1:39254933-39254952
GAAAAAAAACTCTATGGTTATCTTGTAAAG39254933CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460087.1:37170908-37170927
GAAAAAAAACTCTATGGTTATCTTGTAAAG37170908CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460094.1:40342577-40342596
AAAAAAAAACTCTATGGTTATCTTGTAAAG40342577CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460115.1:39505399-39505418
GAAAAAAAACTCTATGGTTATCTTGTAAAG39505399CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460122.1:36812400-36812419
GAAAAAAAACTCTATGGTTATCTTGTAAAG36812400CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460129.1:42935521-42935540
GAAAAAAAACTCTATGGTTATCTTGTAAAG42935521CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460136.1:41587149-41587168
AAAAAAAAACTCTATGGTTATCTTGTAAAG41587149CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460143.1:36808859-36808878
GAAAAAAAACTCTATGGTTATCTTGTAAAG36808859CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460150.1:30418564-30418583
GAAAAAAAACTCTATGGTTATCTTGTAAAG30418564CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460157.1:36131736-36131755
GAAAAAAAACTCTATGGTTATCTTGTAAAG36131736CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460164.1:37080341-37080360
GAAAAAAAACTCTATGGTTATCTTGTAAAG37080341CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460171.1:36550062-36550081
GAAAAAAAACTCTATGGTTATCTTGTAAAG36550062CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460178.1:41323168-41323187
GAAAAAAAACTCTATGGTTATCTTGTAAAG41323168CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460185.1:38748977-38748996
GAAAAAAAACTCTATGGTTATCTTGTAAAG38748977CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460192.1:38740129-38740148
GAAAAAAAACTCTATGGTTATCTTGTAAAG38740129CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460199.1:38235736-38235755
GAAAAAAAACTCTATGGTTATCTTGTAAAG38235736CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460206.1:39289420-39289439
GAAAAAAAACTCTATGGTTATCTTGTAAAG39289420CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460227.1:37345702-37345721
GAAAAAAAACTCTATGGTTATCTTGTAAAG37345702CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460241.1:39969383-39969402
GAAAAAAAACTCTATGGTTATCTTGTAAAG39969383CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460255.1:39128892-39128911
GAAAAAAAACTCTATGGTTATCTTGTAAAG39128892CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460262.1:37495286-37495305
GAAAAAAAACTCTATGGTTATCTTGTAAAG37495286CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460276.1:39918249-39918268
GAAAAAAAACTCTATGGTTATCTTGTAAAG39918249CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460283.1:36491358-36491377
GAAAAAAAACTCTATGGTTATCTTGTAAAG36491358CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460290.1:37244245-37244264
GAAAAAAAACTCTATGGTTATCTTGTAAAG37244245CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460297.1:40314007-40314026
GAAAAAAAACTCTATGGTTATCTTGTAAAG40314007CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460304.1:39914537-39914556
GAAAAAAAACTCTATGGTTATCTTGTAAAG39914537CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590739.1:37628417-37628436
AAAAAAAAACTCTATGGTTATCTTGTAAAG37628417CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590746.1:37671319-37671338
GAAAAAAAACTCTATGGTTATCTTGTAAAG37671319CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590753.1:37487426-37487445
GAAAAAAAACTCTATGGTTATCTTGTAAAG37487426CTTGGACACATGCCATATCCCACCTTCCGCCGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590767.1:37708221-37708240
GAAAAAAAACTCTATGGTTATCTTGTAAAG37708221CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638747.1:37060997-37061016
GAAAAAAAACTCTATGGTTATCTTGTAAAG37060997CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX638754.1:37906761-37906780
GAAAAAAAACTCTATGGTTATCTTGTAAAG37906761CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638775.1:39925285-39925304
CGAAAAAAAACTCTATGGTATCTTGTAAAG39925285CTTGGACACATGCCATATCCCACCTTCCGCCGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638782.1:39239427-39239446
AAAAAAAAACTCTATGGTTATCTTGTAAAG39239427CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX638796.1:39182129-39182148
GAAAAAAAACTCTATGGTTATCTTGTAAAG39182129CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638803.1:39016898-39016917
GAAAAAAAACTCTATGGTTATCTTGTAAAG39016898CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX638810.1:40241873-40241892
GAAAAAAAACTCTATGGTTATCTTGTAAAG40241873CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638817.1:37510239-37510258
GAAAAAAAACTCTATGGTTATCTTGTAAAG37510239CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638831.1:37527947-37527966
GAAAAAAAACTCTATGGTTATCTTGTAAAG37527947CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638873.1:36499927-36499946
GAAAAAAAACTCTATGGTTATCTTGTAAAG36499927CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638880.1:41276336-41276355
AAAAAAAAACTCTATGGTTATCTTGTAAAG41276336CTTGGACACATGCCATATCCCACCTTCCGCTGCCTTAAGTAGCCACACGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cttggacacatgccatatcc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cttggacacatgccatatcc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.156 | 0.147 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGGACACATGCCATATCC&k=0&no_gap=0&offset=0&limit=50
0.236 | 0.080 | search_minus_done; http://172.18.8.135:50400/match?q=GGATATGGCATGTGTCCAAG&k=0&no_gap=0&offset=0&limit=0
0.236 | 0.000 | cgi_end;

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