GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:30:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig8887, mRNA sequence.
JW059131.1:1042-1065
CAAAAGAGAACCACAAGCAGAAATGGTCAC1042CTTGGCCTCAATACATATCCTCTTAGTGATATCTTTATTCAAACTACTTGCAAT
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:19296985-19297008
CAAAAGAGAACCACAAGCAGAAATGGTCAC19296985CTTGGCCTCAATACATATCCTCTTAGTGATATCTTTATTCAAACTACTTGCAAT
KR3B.109I17F.051111T7 KR3B Nicotiana tabacum cDNA clone KR3B.109I17, mRNA sequence.
DW004719.1:268-291
ATTGCAACTAGTACAAATAAAGATATCACA268AAGAGGATATGTATTGAGGCCAAGGTAACCATATCAGCTTGTGGCTCTCTTTTG
Petunia axillaris subsp. axillaris EST, clone dr004P0003E11_F.ab1 2007-08-10.
FN007720.1:301-324
CTTGCAACTAGTATGAATAAAGATATCACA301AAGAGGATATGTATTGAGGCCAAGGTGACCCTTTCAGCTTGTGGTTCACTTTTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:273438227-273438250
ATTGCAAGTAGTTTGAATAAAGATATCACT273438227AAGAGGATATGTATTGAGGCCAAGGTGACCATTTCTGCTTGTGGTTCTCTTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cttggcctcaatacatatcctctt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cttggcctcaatacatatcctctt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGGCCTCAATACATATCCTCTT&k=0&no_gap=0&offset=0&limit=50
0.273 | 0.156 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAGGATATGTATTGAGGCCAAG&k=0&no_gap=0&offset=0&limit=48
0.275 | 0.002 | cgi_end;

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