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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 13:02:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

90104 Capsicum annuum cv. L11 (under stress) cDNA-AFLP Capsicum annuum cDNA, mRNA sequence.
FE193219.1:164-190
CTTCAACTGGAGTCTTTCCATCAAGGACGG164GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTT
TSA: Capsicum annuum MGMT_Contig3633, mRNA sequence.
JW053877.1:1300-1326
CTTCAACTGGAGTCTTTCCATCAAGGACGG1300GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTTT
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:236250773-236250799
CTTCAACTGGAGTCTTTCCATCAAGGACGG236250773GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTTT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:235660152-235660178
CTTCAACTGGAGTCTTTCCATCAAGGACGG235660152GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTTT
KS20001E07 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093418.1:149-175
AAAACGGATCAGGACAAAGCTATAAAGATT149GTCTCTCCTTTGCTGTTACTGATGTTCCCGTCCTTGATGGAAAGACTCCAGTTGAAG
KS21011P12 KS21 Capsicum annuum cDNA, mRNA sequence.
GD100253.1:254-280
AAAACGGATCAGGACAAAGCTATAAAGATT254GTCTCTCCTTTGCTGTTACTGATGTTCCCGTCCTTGATGGAAAGACTCCAGTTGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gaacatcagtaacagcaaaggagagac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gaacatcagtaacagcaaaggagagac | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.276 | 0.267 | search_plus_done; http://172.18.8.135:50400/match?q=GAACATCAGTAACAGCAAAGGAGAGAC&k=0&no_gap=0&offset=0&limit=50
0.571 | 0.296 | search_minus_done; http://172.18.8.135:50400/match?q=GTCTCTCCTTTGCTGTTACTGATGTTC&k=0&no_gap=0&offset=0&limit=46
0.573 | 0.002 | cgi_end;

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