GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:05:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS15026F09 KS15 Capsicum annuum cDNA, mRNA sequence.
GD065838.1:459-482
TCCGCCATATACGGCGGTGGGGCATCGTGG459GAGAAACAAGTACGTCACTCCTCCACGCCCCACCGCCCTAACGGCCTCTCCGTC
TSA: Capsicum annuum MGMT_Contig33142 mRNA sequence.
JW083386.1:553-576
TCCGCCATATACGGCGGTGGGGCATCGTGG553GAGAAACAAGTACGTCACTCCTCCACGCCCCACCGCCCTAACGGCCTCTCCGTC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:286918615-286918638
TCCGCCATATACGGCGGTGGGGCATCGTGG286918615GAGAAACAAGTACGTCACTCCTCCACGCCCCACCGCCGTAACGGCCTCTCCGTC
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:5182501-5182524
GACGGAGAGGCCGTTAGGGCGGTGGGGCGT5182501GGAGGAGTGACGTACTTGTTTCTCCCACGATGCCCCACCGCCGTATATGGCGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gagaaacaagtacgtcactcctcc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gagaaacaagtacgtcactcctcc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.410 | 0.402 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAAACAAGTACGTCACTCCTCC&k=0&no_gap=0&offset=0&limit=50
0.487 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGGAGTGACGTACTTGTTTCTC&k=0&no_gap=0&offset=0&limit=47
0.488 | 0.001 | cgi_end;

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