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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 07:14:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Felis catus Senzu DNA, chromosome: B1, American Shorthair breed.
AP023155.1:49462016-49462035
TCTCCTCTCCAGTAAAATCAGAAAGCTATA49462016GAGAAGCAAATGCAAAACCCACACTGAACAATTCCCCCAAAAAGGGCCAG
Podarcis cretensis genome assembly, chromosome: 1.
OX638149.1:37979640-37979659
ATGATGCCCGCTTCTCTTAATAGCATCCTT37979640GAGAAGCAAATGCAAAACCCACCCCCACACCTCTCTTTTTCTGTCTGTCA
Zootoca vivipara genome assembly, chromosome: 1.
OY735902.1:35893471-35893490
ATGATGCTCGCATCTCTTAATAGCATCCTT35893471GAGAAGCAAATGCAAAACCCACCCCCACGCCTCTCTTTTTCTGGCTGTCA
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143366.1:9684128-9684147
TACGGGTAGAAAGTATCACCGTGGACTGAA9684128GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGAAGCCAT
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143383.1:8431305-8431324
CAGGTAGAAAGTATCACCATGGACTGCGAA8431305GAGAAGCAAATGCAAAACCCTAGCCCCACGGAAGAGACAGTCGAAGCCAT
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:9132859-9132878
TAGGGCAAATAACACAGGGTGGACAGGGAA9132859GAGAAGCAAATGCAAAACCCTAGACACACACGTAGCAGACAGTTGATGCC
Malus sylvestris genome assembly, chromosome: 9.
OU696511.1:9544412-9544431
TACGGGTAGAAAGTATCACCATGGACTGAA9544412GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGAAGCCAT
Malus domestica genome assembly, chromosome: 9.
OU696685.1:9586924-9586943
TACGGGTAGAAAGTATCACCGTGGACTGAA9586924GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGAAGCCAT
Malus domestica genome assembly, chromosome: 9.
OU744550.1:9711460-9711479
TACGGGTAGAAAGTATCACCGTGGACTGAA9711460GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGAAGCCAT
Malus domestica genome assembly, chromosome: 9.
OU744961.1:9682973-9682992
TACGGGTAGAAAGTATCACCGTGGACTGAA9682973GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGAAGCCAT
Malus domestica genome assembly, chromosome: 9.
OU744999.1:9222576-9222595
TACGGGTAGAAAGTATCACCGTGGACTGAA9222576GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGAAGCCAT
Malus x robusta genome assembly, chromosome: 8.
OY720332.1:9413517-9413536
TACGGGTAGAAAGTATCACCGTGGACTGAA9413517GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGAAGCCAT
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:10675050-10675069
CAGGGCAAATAACACAGGGTGGACGGGGAA10675050GAGAAGCAAATGCAAAACCCTAGACACAGACGGAGCAGATGGTTGATGTC
Pyrus communis genome assembly, chromosome: 7.
OY757074.1:7397369-7397388
CAGGTAGAAAGCATCACCATGGACTGTGAA7397369GAGAAGCAAATGCAAAACCCTAGCCCCACGGAGGAGACAGTTGATGCCAT
Podarcis lilfordi genome assembly, chromosome: 1.
OX395126.1:100694044-100694063
TGACAGCCAGAAAAAGAGAGATGTGGGGGT100694044GGGTTTTGCATTTGCTTCTCAAGGATGCTATTAAGAGATGCGGGCATCAT
Tetrao urogallus genome assembly, chromosome: Z.
OX596297.1:71726735-71726754
AAGTTGTGCCTTAGACAGACCTAAAAATTA71726735GGGTTTTGCATTTGCTTCTCACTTTAAAACTATACCTAACACTGTCAAAA
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141918.1:25641104-25641123
ATGGCTTCAACTGTCTCCTCCGTGGGGCTA25641104GGGTTTTGCATTTGCTTCTCCTCAGTCCATGGTGATACTTTCTACCTGTA
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141935.1:26161060-26161079
ATGGCTTCAACTGTCTCCTCCGTGGGGCTA26161060GGGTTTTGCATTTGCTTCTCTTCAGTCCACGGTGATACTTTCTACCCGTA
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:25431991-25432010
ATGGCTTCAACTGTCTCCTCCGTGGGGCTA25431991GGGTTTTGCATTTGCTTCTCTTCAGTCCATGGTGATACTTTCTACCTGTA
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:26299679-26299698
ATGGCTTCAACTGTCTCCTCCGTGGGGCTA26299679GGGTTTTGCATTTGCTTCTCTTCAGTCCATGGTGATACTTTCTACCTGTA
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:19245145-19245164
GGCATCAACTGTCTGCTCCGTCTGTGTCTA19245145GGGTTTTGCATTTGCTTCTCTTCCCTTTCCACCCTGTGTTGTTTGCCCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gagaagcaaatgcaaaaccc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gagaagcaaatgcaaaaccc | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.326 | 0.317 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAAGCAAATGCAAAACCC&k=0&no_gap=0&offset=0&limit=50
0.446 | 0.121 | search_minus_done; http://172.18.8.135:50400/match?q=GGGTTTTGCATTTGCTTCTC&k=0&no_gap=0&offset=0&limit=36
0.451 | 0.005 | cgi_end;

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