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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:56:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 9.
LR862389.2:58737048-58737067
AAACAAAAGTCGTTATAAAGACCCACACTG58737048GAGGAGCTGAAGCAGCAGAGGTGTTTTTAGACAGGGTCTCACTGGCCCTA
Heterocephalus glaber genome assembly, chromosome: 18.
OX090926.1:44428289-44428308
GGGGAGATTCAAGCAGCCCAGGAGAGGGAA44428289GAGGAGCTGAAGCAGCAGAGACAAGTGCTGCAGAGCACCCCAAGCCGCAG
Heterocephalus glaber genome assembly, chromosome: 23.
OZ001088.1:44698608-44698627
GGGGAGATTCAAGCAGCCCAGGAGAGGGAA44698608GAGGAGCTGAAGCAGCAGAGACAAGTGCTGCAGAGCACCCCAAGCCGCAG
Heterocephalus glaber genome assembly, chromosome: 23.
OZ001131.1:44824341-44824360
GGGGAGATTCAAGCAGCCCAGGAGAGGGAA44824341GAGGAGCTGAAGCAGCAGAGACAAGTGCTGCAGAGCACCCCAAGCCGCAG
Cyprinus carpio genome assembly, scaffold: LG3, chromosome: 3.
LN590693.1:6521788-6521807
GGTGCGAAGGAGCAGTTGGTGAAAGAGAAT6521788GAGGAGCTGAAGCAGCAGAGAGAGGAGCTGGAGGTGAGGATGAGTGCACT
Rhinatrema bivittatum genome assembly, chromosome: 1.
LR584387.1:576033025-576033044
TAAAGGGCTGGCTGGTCCGCGCACCTAGGG576033025GAGGAGCTGAAGCAGCAGAGGACGTCGAGCACCGGCATGGCTTGGAGAGC
Salmo trutta genome assembly, chromosome: 9.
LR584409.1:13934292-13934311
GGAGGAGATACAGGCCTGCTGGACCAGCTG13934292GAGGAGCTGAAGCAGCAGAGTGAAGAGGACAAAGAGAGTCTGAAGCAGGC
Salarias fasciatus genome assembly, chromosome: 8.
LR597443.1:6769318-6769337
GCGGCGCTGCTGAAGCGTTTCCTGGCTCTG6769318GAGGAGCTGAAGCAGCAGAGGCAGCAGGGGATGGAGTACGGAGAGGAGGA
Trachurus trachurus genome assembly, chromosome: 12.
LR991645.1:11447545-11447564
AGCCCCCTTCCTCTTCATGTGCTTCTGTCA11447545GAGGAGCTGAAGCAGCAGAGGAAACATATTTCTGAAGACACACACACACG
Bufo bufo genome assembly, chromosome: 3.
LR991669.1:463672104-463672123
CAGTAGCAGCACAACAGGCGCTCCAGGGAA463672104GAGGAGCTGAAGCAGCAGAGGTACCCCATAATAATAATGGAAGGAGAAAG
Rutilus rutilus genome assembly, chromosome: 6.
OX637938.1:24264488-24264507
GGTGCAAAGGAGCAGCTGGCGAAAGAGAAT24264488GAGGAGCTGAAGCAGCAGAGAGAGGAGCTGGATGTGAGGATGAGTGCGCT
Carassius carassius genome assembly, chromosome: 20.
OY720487.1:19339059-19339078
GGTGCGAAGGAGCAGTTGGCAAAAGAGAAT19339059GAGGAGCTGAAGCAGCAGAGAGAGGAGCTGGAGGTGAGGATGAGTGCACT
Cyclopterus lumpus genome assembly, chromosome: 17.
OY735164.1:5984023-5984042
CCATTAAGTTGGGGGACTTGCAAAGAGATG5984023GAGGAGCTGAAGCAGCAGAGGCAGCGATATTCTAGCATCCTATATTTCCT
Conger conger genome assembly, chromosome: 4.
OY741317.1:21522877-21522896
GGTCTGAAGGAACAGCTGTCGAAGGAGAAC21522877GAGGAGCTGAAGCAGCAGAGGGAGGAGCTGGAGGTGCGCACAGGTGCCCT
Conger conger genome assembly, chromosome: 5.
OY741318.1:49855726-49855745
GGAGCGAAGGAGCAGCTGTCGCAGGACTGC49855726GAGGAGCTGAAGCAGCAGAGGGAGGAGCTGGAGGTGCGGCTGAGCGCGCT
Mdfw2025h08.y1 Mdfw Malus domestica cDNA clone Mdfw2025h08 5', mRNA sequence.
CN494717.1:85-104
GGACCCTCAATGCGCTTGTTAGAGCTGCTG85GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATCT
Mdfw2048d16.y1 Mdfw Malus domestica cDNA clone Mdfw2048d16 5' similar to TR:Q9SIV8 Q9SIV8 PUTATIVE CDC21 PROTEIN, mRNA sequence.
CN993786.1:234-253
GGACCCTCAATGCGCTTGTTAGAGCTGCTG234GAGGAGCTGAAGCAGCAGAGCTCTGGCGGTGAACTCCACCTCAACGATCT
Pyrus pyrifolia mRNA, clone: NLE2_13_28, 3' end sequence, expressed in leaf.
HX745203.1:626-645
GGACCCTCAATGCGCTTGTTAGAGCTGCTG626GAGGAGCTGAAGCAGCAGAGCTCTGGTGGCGAACTCCACCTCAATGATCT
TSA: Pyrus pyrifolia mRNA, contig: contig_5421revcomp.
FX412959.1:626-645
GGACCCTCAATGCGCTTGTTAGAGCTGCTG626GAGGAGCTGAAGCAGCAGAGCTCTGGTGGCGAACTCCACCTCAATGATCT
TSA: Pyrus communis mRNA, contig: lc30885.
FX639032.1:245-264
GGACCCTCAATGCGCTTGTTAGAGCTGCTG245GAGGAGCTGAAGCAGCAGAGTTCTGGCAGTGAACTCCACCTCAACGATCT
TSA: Pyrus communis mRNA, contig: lc31831.
FX639903.1:28-47
CCCTCAATGCGCTTGTTAGAGCTGCTG28GAGGAGCTGAAGCAGCAGAGCTCTGGTGGCGAACTCCACCTCAATGATCT
S235P654FG2.T0 ItalianGreyhound Canis familiaris STS genomic, sequence tagged site.
BV272830.1:347-366
AAAATCAGGCTCTAAAGTCAGGAGGGACCA347GAGGAGCTGAAGCAGCAGAGCACACATCATCGACAAGCCTTAGGGAAGGG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:8953818-8953837
TGATGTGTTTAATATGCCCTGCAGCTGCTG8953818GAGGAGCTGAAGCAGCAGAGCTCTGGAGGCGAACTCCACCTCAATGATGT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:8674217-8674236
TGATGTGTTTAATATGTCCTGCAGCTGCTG8674217GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATGT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:8811889-8811908
TGATGTGTTTAATATGCCCTGCAGCTGCTG8811889GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCACCTCAATGATGT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:10803672-10803691
TAATGTGTTTAATATGTCCTGCAGCTGCTG10803672GAGGAGCTGAAGCAGCAGAGCTCTGGCGGTGAACTCCACCTCAACGATGT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:8898741-8898760
TGATGTGTTTAATATGTCCTGCAGCTGCTG8898741GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATGT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:8466553-8466572
TGATGTGTTTAATATGTCCTGCAGCTGCTG8466553GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCACCTCAATGATGT
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:10589183-10589202
TAATGTGTTTAATATGTCCTGCAGCTGCTG10589183GAGGAGCTGAAGCAGCAGAGCTCTGGCGGTGAACTCCACCTCAACGATGT
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:8578431-8578450
TGATGTGTTTAATATGTCCTGCAGCTGCTG8578431GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATGT
Malus domestica genome assembly, chromosome: 5.
OU696681.1:10587302-10587321
TAATGTGTTTAATATGTCCTGCAGCTGCTG10587302GAGGAGCTGAAGCAGCAGAGCTCTGGCGGTGAACTCCACCTCAACGATGT
Malus domestica genome assembly, chromosome: 10.
OU696686.1:8940952-8940971
TGATGTGTTTAATATGTCCTGCAGCTGCTG8940952GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATGT
Malus domestica genome assembly, chromosome: 5.
OU744546.1:10502397-10502416
TAATGTGTTTAATATGTCCTGCAGCTGCTG10502397GAGGAGCTGAAGCAGCAGAGCTCTGGCGGTGAACTCCACCTCAACGATGT
Malus domestica genome assembly, chromosome: 10.
OU744551.1:8648827-8648846
TGATGTGTTTAATATGTCCTGCAGCTGCTG8648827GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATGT
Malus domestica genome assembly, chromosome: 5.
OU744957.1:10333419-10333438
TAATGTGTTTAATATGTCCTGCAGCTGCTG10333419GAGGAGCTGAAGCAGCAGAGCTCTGGCGGTGAACTCCACCTCAACGATGT
Malus domestica genome assembly, chromosome: 10.
OU744962.1:8637599-8637618
TGATGTGTTTAATATGTCCTGCAGCTGCTG8637599GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATGT
Malus domestica genome assembly, chromosome: 5.
OU744995.1:10842591-10842610
TAATGTGTTTAATATGTCCTGCAGCTGCTG10842591GAGGAGCTGAAGCAGCAGAGCTCTGGCGGTGAACTCCACCTCAACGATGT
Malus domestica genome assembly, chromosome: 10.
OU745000.1:8299985-8300004
TGATGTGTTTAATATGTCCTGCAGCTGCTG8299985GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCATCTCAATGATGT
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:8225026-8225045
TGATGTGTTTAATATGCCCTGCAGCTGCTG8225026GAGGAGCTGAAGCAGCAGAGCTCTGGCGGCGAACTCCACCTCAATGATGT
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:11518864-11518883
TGATGTGTTTAATATGTCCTGCAGCTGCTG11518864GAGGAGCTGAAGCAGCAGAGCTCTGGTGGCGAACTCCACCTCAATGATGT
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:29438429-29438448
TAATGTGTTTAATATGTCCTGCAGCTGCTG29438429GAGGAGCTGAAGCAGCAGAGTTCTGGCAGTGAACTCCACCTCAACGATGT
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:5551117-5551136
TGATGTGTATAATATGTCCTGCAGCTGCTG5551117GAGGAGCTGAAGCAGCAGAGCTCTGGTGGCGAACTCCACCTCAATGATGT
Sphingomonas sp. LY54 chromosome, complete genome.
CP141588.1:904141-904160
ATGGGGCCGCTGACTCCGGCCATGCGCGCC904141GAGGAGCTGAAGCAGCAGAGCGACTTCAAATTCGATATCCCGTGGACGAC
Heterocephalus glaber genome assembly, chromosome: 18.
OX090958.1:59371782-59371801
CTGCGGCTTGGGGTGCTCTGCAGCACTTGT59371782CTCTGCTGCTTCAGCTCCTCTTCCCTCTCCTGGGCTGCTTGAATCTCCCC
Muscardinus avellanarius genome assembly, chromosome: 1.
OY726557.1:182277098-182277117
GTCTGGAGCAGGTGAGTGGCCTCCTGCCTC182277098CTCTGCTGCTTCAGCTCCTCCTGGCCCCCACTGACCCCTTCACTTTCTTT
Capricornis sumatraensis isolate serow.1 chromosome 14.
CP135640.1:22803885-22803904
AGTTTCAGAATGCTTTCTTGTACTCTGACC22803885CTCTGCTGCTTCAGCTCCTCACCACAGGCTCCTTTTTCCATTTTTTCAAG
Oryzias latipes strain HSOK chromosome 16.
CP020636.1:30221529-30221548
AAATATGCATGAATGAACCTGAAGACGTGT30221529CTCTGCTGCTTCAGCTCCTCTAACCTCTCTACATGCGTTTTAGAACTTTA
Oryzias latipes strain Hd-rR chromosome 16 sequence.
CP020680.1:29397362-29397381
AAATATGCATGAATGAACCTGAAGTCGTGT29397362CTCTGCTGCTTCAGCTCCTCTAACATCTCTACATGCGTTTTAGAACTTTA
Salmo trutta genome assembly, chromosome: 22.
LR584440.1:29191134-29191153
AGAGCACTGACTCTGACCTCCAGCTCCTCC29191134CTCTGCTGCTTCAGCTCCTCATTTTCCTTCTGCAGCTGGTCCTTAGAGCC
Chanos chanos genome assembly, chromosome: 4.
LR697109.1:6368284-6368303
AGGGCACTGACTCTCACCTCCAGCTCCTCC6368284CTCTGCTGCTTCAGCTCCTCATTCTCCTTCACCAACTGATCCTTAGACGC
Astatotilapia calliptera genome assembly, chromosome: 15.
LS420033.2:24947523-24947542
GGTTAGGTTTTGATTCAGCAGGAGCCTCTG24947523CTCTGCTGCTTCAGCTCCTCCAGCTGCTGCGAGGAACTTTACGAGGAGCC
Phoxinus phoxinus genome assembly, chromosome: 5.
OX424413.1:23038292-23038311
AGCGCACTCATCCTCACATCCAGCTCCTCT23038292CTCTGCTGCTTCAGCTCCTCGTTCTCTTTCGCCAGCTGCTCCTTTGCACC
Squalius cephalus genome assembly, chromosome: 7.
OX439253.1:24795203-24795222
AGCGCACTCATCCTCACATCCAGTTCCTCT24795203CTCTGCTGCTTCAGCTCCTCGTTCTCTTTCGCCAGCTGCTCCTTTGCACC
Mddb5005A23_e1265.g1 Mddb Malus domestica cDNA 5', mRNA sequence.
GO566478.1:406-425
AGATCATTGAGATGGAGTTCGCCGCCAGAG406CTCTGCTGCTTCAGCTCCTCCAGCAGCTCTAACAAGCGCATTGAGGGTCC
Mdfw2025H08_e15704.g1 Mdfw Malus domestica cDNA 5', mRNA sequence.
GO568269.1:518-537
AGATCATTGAGATGGAGTTCGCCGCCAGAG518CTCTGCTGCTTCAGCTCCTCCAGCAGCTCTAACAAGCGCATTGAGGGTCC
Pyrus pyrifolia mRNA, clone: NLE2_13_28, 5' end sequence, expressed in leaf.
HX767745.1:426-445
AGATCATTGAGGTGGAGTTCGCCACCAGAG426CTCTGCTGCTTCAGCTCCTCCAGCAGCTCTAACAAGCGCATTGAGGGTCC
TSA: Haplochromis burtoni contig32638.Habupool mRNA sequence.
JL509488.1:208-227
GGTTAGGTTTTGATTCAGCAGGAGCCTCTG208CTCTGCTGCTTCAGCTCCTCCAGCTGCTGCGAGGAACTTTACGAGGAGCC
TSA: Pyrus x bretschneideri Unigene36718_XinShao mRNA sequence.
JR629049.1:122-141
AGATCATTGAGGTGGAGTTCGCCACCAGAG122CTCTGCTGCTTCAGCTCCTCCAGCAGCTCTAACAAGCGCATTGAGGGTCC
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:36170073-36170092
ACATCGTTGATGTGGAGTTCACCGCCAGAG36170073CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGACATATTAAACACATTA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:35745209-35745228
ACATCGTTGAGGTGGAGTTCACCGCCAGAG35745209CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGACATATTAAACACATTA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:34730150-34730169
ACATCGTTGAGGTGGAGTTCACCGCCAGAG34730150CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGACATATTAAACACATTA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:12225-12244
ACATCATTGAGGTGGAGTTCGCCGCCAGAG12225CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGGCATATTAAACACATCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:36144745-36144764
ACATCGTTGAGGTGGAGTTCACCGCCAGAG36144745CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGACATATTAAACACATTA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:15037807-15037826
ACATCGTTGAGGTGGAGTTCACCGCCAGAG15037807CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGACATATTAAACACATTA
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:35592035-35592054
ACATCGTTGAGGTGGAGTTCACCGCCAGAG35592035CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGACATATTAAACACATTA
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:34663256-34663275
ACATCGTTGAGGTGGAGTTCACCGCCAGAG34663256CTCTGCTGCTTCAGCTCCTCCAGCAGCTGCAGGACATATTAAACACATTA
Lotmaria passim strain 422 isolate BRL chromosome 16.
CP140177.1:260176-260195
GAGTTCGCCGCTGCAGCGAGGCGGCAGCTG260176CTCTGCTGCTTCAGCTCCTCAAAGCGACGAAAGATCGCTGTCAAGACGTT
Lotmaria passim strain 422 isolate BRL chromosome 16.
CP140207.1:261112-261131
GAGTTCGCCGCTGCAGCGAGGCGGCAGCTG261112CTCTGCTGCTTCAGCTCCTCAAAGCGACGAAAGATCGCTGTCAAGACGTT
Branchiostoma lanceolatum genome assembly, chromosome: 11.
OV696696.1:2268094-2268113
AGGCTCTCCTTGACCCTCATCATGTTTTCC2268094CTCTGCTGCTTCAGCTCCTCCTCGTGGTCCGCCCGTTCCCTTTCCAGCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gaggagctgaagcagcagag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gaggagctgaagcagcagag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.373 | 0.365 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGAGCTGAAGCAGCAGAG&k=0&no_gap=0&offset=0&limit=50
0.824 | 0.451 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTGCTGCTTCAGCTCCTC&k=0&no_gap=0&offset=0&limit=7
0.841 | 0.017 | cgi_end;

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