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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 14:05:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS14023H05 KS14 Capsicum annuum cDNA, mRNA sequence.
GD059606.1:297-320
GCTGATCTTGATGCTCTAGGTGCCCTAGGC297GATGTTGGTTGGTACTGTATACGCGCAATCTTGTGGATTACTGATTATGAATTG
KS14036H08 KS14 Capsicum annuum cDNA, mRNA sequence.
GD060810.1:297-320
GCTGATCTTGATGCTCTAGGTGCCCTAGGC297GATGTTGGTTGGTACTGTATACGCGCAATCTTGTGGATTACTGATTATGAATTG
KS14037F07 KS14 Capsicum annuum cDNA, mRNA sequence.
GD060877.1:297-320
GCTGATCTTGATGCTCTAGGTGCCCTAGGC297GATGTTGGTTGGTACTGTATACGCGCAATCTTGTGGATTACTGATTATGAATTG
KS18050H04 KS18 Capsicum annuum cDNA, mRNA sequence.
GD086146.1:278-301
GCTGATCTTGATGCTCTAGGTGCCCTAGGC278GATGTTGGTTGGTACTGTATACGCGCAATCTTGTGGATTACTGATTATGAATTG
TSA: Capsicum annuum MGMT_Contig13149, mRNA sequence.
JW063393.1:244-267
GCTGATCTTGATGCTCTAGGTGCCCTAGGC244GATGTTGGTTGGTACTGTATACGCGCAATCTTGTGGATTACTGATTATGAATTG
TSA: Capsicum annuum MA_MegaContig_19767, mRNA sequence.
JW158703.1:789-812
GCTGATCTTGATGCTCTAGGTGCCCTAGGC789GATGTTGGTTGGTACTGTATACGCGCAATCTTGTGGATTACTGATTATGAATTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 4.
CP124728.1:39489438-39489461
GCTGATCTTGATGCTCTAGGTGCCCTAGGC39489438GATGTTGGTTGGTACTGTATACGCGCAATCTTGTGGATTACTGATTATGAATTG
Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:213605317-213605340
CAATTCATAATCAGTAATCCACAAGATTGC213605317GCGTATACAGTACCAACCAACATCGCCTAGGGCACCTAGAGCATCAAGATCAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gatgttggttggtactgtatacgc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gatgttggttggtactgtatacgc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.457 | 0.448 | search_plus_done; http://172.18.8.135:50400/match?q=GATGTTGGTTGGTACTGTATACGC&k=0&no_gap=0&offset=0&limit=50
0.491 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTATACAGTACCAACCAACATC&k=0&no_gap=0&offset=0&limit=43
0.491 | 0.001 | cgi_end;

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