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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:55:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

WO 2005095603-A/954: Detection instruments using polynucleotide mapped on barley chromosome.
DD469206.1:523-545
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG523GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTG
Sequence 954 from patent US 7977087.
GY284497.1:523-545
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG523GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTG
Hordeum vulgare subsp. vulgare cv.Akashinriki cDNA clone:baak20l07, 3' mRNA sequence.
BJ456364.1:519-541
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG519GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
HG994375.1:30069312-30069334
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG30069312GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR812262.1:41954199-41954221
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41954199GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR824633.1:38910779-38910801
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG38910779GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828088.1:39420561-39420583
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG39420561GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828102.2:41302058-41302080
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41302058GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828116.1:38697911-38697933
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG38697911GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828133.1:39219207-39219229
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG39219207GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828147.2:37633868-37633890
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG37633868GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828182.1:38282917-38282939
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG38282917GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828267.1:38322062-38322084
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG38322062GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OU015702.1:38065552-38065574
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG38065552GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OU701464.1:32635427-32635449
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG32635427GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459903.1:40296047-40296069
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG40296047GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX459917.1:41598546-41598568
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41598546GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX459931.1:42708172-42708194
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG42708172GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX459971.1:42649042-42649064
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG42649042GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459978.1:40386466-40386488
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG40386466GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX459985.1:41830211-41830233
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41830211GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX459992.1:37940735-37940757
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG37940735GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459999.1:40966544-40966566
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG40966544GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460006.1:39673064-39673086
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG39673064GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460013.1:39597315-39597337
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG39597315GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460027.1:42099256-42099278
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG42099256GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX460034.1:41863927-41863949
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41863927GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460041.1:41889905-41889927
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41889905GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460048.1:41473399-41473421
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41473399GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460076.1:42579540-42579562
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG42579540GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460101.1:40939732-40939754
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG40939732GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460104.1:42018181-42018203
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG42018181GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460125.1:44068906-44068928
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG44068906GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460132.1:39571558-39571580
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG39571558GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460160.1:38525648-38525670
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG38525648GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460174.1:41073809-41073831
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41073809GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460188.1:44213170-44213192
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG44213170GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460216.1:41670307-41670329
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41670307GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460272.1:44148402-44148424
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG44148402GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590735.1:41649280-41649302
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41649280GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590749.1:40347349-40347371
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG40347349GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 2H.
OX590756.1:37057354-37057376
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG37057354GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590763.1:43986827-43986849
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG43986827GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX638654.1:41540937-41540959
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41540937GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare genome assembly, chromosome: 2H.
OX638757.1:41223608-41223630
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41223608GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638764.1:44892984-44893006
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG44892984GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638771.1:39111736-39111758
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG39111736GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638778.1:41332699-41332721
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41332699GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX638792.1:41555658-41555680
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG41555658GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638813.1:39883569-39883591
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG39883569GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638876.1:44969362-44969384
CGCCAGGCTGCCGTCGCCGCCGGACCGGGG44969362GCAGTTGGCCCGGAGAGTTGTGGCGAAGGTGGTGTCGATGTTAGCCTCGTTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gcagttggcccggagagttgtgg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gcagttggcccggagagttgtgg | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.224 | 0.215 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGTTGGCCCGGAGAGTTGTGG&k=0&no_gap=0&offset=0&limit=50
0.340 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=CCACAACTCTCCGGGCCAACTGC&k=0&no_gap=0&offset=0&limit=0
0.340 | 0.000 | cgi_end;

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