GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 12:19:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea trifida cultivar NCNSP0306 chromosome 4.
CP025647.1:3501351-3501374
AGACAATCCCCTCGAAAATTTCTAGTGGCA3501351GCCGCTAATTCACGGAATGTAAAAGTCTTGGCCGCAATTTGATTGGCTCCTCCA
Ipomoea triloba cultivar NCNSP0323 chromosome 4.
CP025663.1:4068155-4068178
AGACAATCGCCTCGAAAATTTCTAGTGGCA4068155GCCGCTAATTCACGGAATGTAAAAGTCTTGGCTGCAATTTGATTGGCTCCTCCA
Ipomoea nil cDNA clone:jmsf36g04, 5' end.
CJ747095.1:263-286
NGATGGANCCAATCAAATTGCANCCAAGAC263TTTTACATTCCGTGAATTAGCGGCTGCCACCANAAATTTTCGGGGCGATTGTCT
TSA: Ipomoea batatas Contig_7442.Ipbalsr mRNA sequence.
JP112030.1:297-320
TGGAGGAGCCAATCAAATTGCGGCCAAGAC297TTTTACATTCCGTGAATTAGCGGCTGCCACTAGAAATTTTCGAGGCGATTGTCT
Ipomoea nil DNA, BAC clone: JMHiBa-032J22, sequence: JMHiBa-032J22.b.
GA940712.1:563-586
GGATGGAGCCAATCAAATTGCAGCCAAGAC563TTTTACATTCCGTGAATTAGCGGCTGCCACCAGAAATTTTCGGGGCGATTGTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gccgctaattcacggaatgtaaaa
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gccgctaattcacggaatgtaaaa | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.094 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=GCCGCTAATTCACGGAATGTAAAA&k=0&no_gap=0&offset=0&limit=50
0.184 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTACATTCCGTGAATTAGCGGC&k=0&no_gap=0&offset=0&limit=48
0.186 | 0.002 | cgi_end;

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