GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 20:03:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jm19m06, 5' end, single read.
BJ556283.1:13-36
CAGAGAGTGGAG13GGGAGTGAGGGAGGGAGAAAGATAGAGAGAGAGAGAGAGAGAGAGAGATTCCTG
Ipomoea nil cDNA clone:jmsf45g11, 5' end.
CJ754960.1:15-38
GACAGAGAGTGGAG15GGGAGTGAGGGAGGGAGAAAGATAGAGAGAGAGAGAGAGAGAGAGAGATTCCTG
Strongylocentrotus purpuratus clone R3-3090A18, WORKING DRAFT SEQUENCE, 19 unordered pieces.
AC201524.1:17297-17320
GAGGGAGAGAGAATGAAAGAGAGAGAGAGG17297GGGAGTGAGGGAGGGAGAAAGATAGTAGAGGGTAAGATAAGAGGAGAGGGAGAG
Borostomias antarcticus genome assembly, chromosome: 34.
OX465237.1:3320285-3320308
CTGATGGGTGGAGCCCTATACTAGGGTTTG3320285TATCTTTCTCCCTCCCTCACTCCCACAATCCCTCACTCCGACAATCCCTCACTC
Leptopterna dolabrata genome assembly, chromosome: 1.
OX940975.1:82803774-82803797
ATTGAAAATTCATGTTAGTTTCAACTTGGA82803774TATCTTTCTCCCTCCCTCACTCCCTCTCTCTCCCTCTCTCCCCCCTTTCTCGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gggagtgagggagggagaaagata
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gggagtgagggagggagaaagata | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.150 | 0.141 | search_plus_done; http://172.18.8.135:50400/match?q=GGGAGTGAGGGAGGGAGAAAGATA&k=0&no_gap=0&offset=0&limit=50
0.184 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=TATCTTTCTCCCTCCCTCACTCCC&k=0&no_gap=0&offset=0&limit=47
0.186 | 0.001 | cgi_end;

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