GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 17:33:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jm19m06, 5' end, single read.
BJ556283.1:206-229
TGAACGCAAATTTGCAGCCTTTAAGGTATG206GGTTTGAGAGGATTCTGTCCCTCAGAAGAAGTATTTGCGCTAAAGCTGTGATGT
Ipomoea nil cDNA clone:jmsf45g11, 5' end.
CJ754960.1:208-231
TGAACGCAAATTTGCAGCCTTTAAGGTATG208GGTTTGAGAGGATTCTGTCCCTCAGAAGAAGTATTTGCGCTAAAGCTGTGATGT
Ipomoea nil mRNA, clone: JMFN032I04, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY932875.1:186-209
TGAACGCAAATTTGCAGCCTTTAAGGTATG186GGTTTGAGAGGATTCTGTCCCTCAGAAGAAGTATTTGCGCTAAAGCTGTGATGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ggtttgagaggattctgtccctca
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ggtttgagaggattctgtccctca | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.224 | 0.216 | search_plus_done; http://172.18.8.135:50400/match?q=GGTTTGAGAGGATTCTGTCCCTCA&k=0&no_gap=0&offset=0&limit=50
0.250 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=TGAGGGACAGAATCCTCTCAAACC&k=0&no_gap=0&offset=0&limit=47
0.250 | 0.000 | cgi_end;

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