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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:14:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

HW02J20u Hordeum vulgare cDNA clone 3'sequence; expressed sequence tag;.
AL500978.1:332-355
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC332GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
HY07G04u Hordeum vulgare cDNA clone 3'sequence; expressed sequence tag;.
AL511222.1:323-346
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC323GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
HT10E09u HT Hordeum vulgare subsp. vulgare cDNA clone HT10E09 3-PRIME, mRNA sequence.
CA010409.1:314-337
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC314GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGG
HC09B23y CH Hordeum vulgare cDNA clone HC09B23 3-PRIME, mRNA sequence.
CB872711.1:167-190
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC167GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
BG02020A1G08.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone BG02020A1G08.r1, mRNA sequence.
FF348018.1:284-307
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC284GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
BG04009B1C12.r2 BG04- primary and normalized libraries Dactylis glomerata cDNA, mRNA sequence.
HO122417.1:405-428
GTAGTCGGTGCCGCCGCCGGTGGTGGCGCC405GTAGCTGCCCTTCCCCTCGTTCACCCCCCA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR824633.1:661998324-661998347
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC661998324GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828095.1:644417727-644417750
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC644417727GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828109.1:640366905-640366928
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC640366905GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828116.1:642412970-642412993
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC642412970GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828147.2:661063925-661063948
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC661063925GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828168.1:658705519-658705542
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC658705519GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828182.1:662022491-662022514
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC662022491GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828189.1:674234484-674234507
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC674234484GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828267.1:656731353-656731376
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC656731353GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828274.1:686968074-686968097
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC686968074GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459903.1:647184091-647184114
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC647184091GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX459910.1:652946462-652946485
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC652946462GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459978.1:647648300-647648323
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC647648300GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX459985.1:646402327-646402350
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC646402327GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX459992.1:647850351-647850374
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC647850351GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460006.1:666335807-666335830
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC666335807GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460020.1:651289183-651289206
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC651289183GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460027.1:654447845-654447868
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC654447845GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460041.1:650679138-650679161
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC650679138GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460048.1:659894518-659894541
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC659894518GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460069.1:655443586-655443609
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC655443586GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460090.1:656705615-656705638
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC656705615GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460101.1:648255156-648255179
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC648255156GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460104.1:651065597-651065620
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC651065597GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460111.1:650054815-650054838
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC650054815GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460132.1:648990095-648990118
GTAGTCGGGGCCGCCGCCGGTGGTGACGCC648990095GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460139.1:654074134-654074157
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC654074134GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460146.1:648708354-648708377
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC648708354GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460153.1:648096032-648096055
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC648096032GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460160.1:645612622-645612645
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC645612622GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460181.1:650142192-650142215
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC650142192GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460188.1:647828310-647828333
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC647828310GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460195.1:649630805-649630828
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC649630805GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460202.1:650074953-650074976
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC650074953GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460209.1:650201958-650201981
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC650201958GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460230.1:648398457-648398480
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC648398457GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460237.1:647437001-647437024
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC647437001GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460251.1:650980817-650980840
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC650980817GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 1H.
OX460257.1:552022698-552022721
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC552022698GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460272.1:650660034-650660057
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC650660034GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460279.1:652363385-652363408
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC652363385GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460286.1:649499387-649499410
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC649499387GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460293.1:652815090-652815113
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC652815090GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460300.1:647927401-647927424
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC647927401GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590735.1:645040224-645040247
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC645040224GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590744.1:630778879-630778902
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC630778879GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590749.1:651412788-651412811
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC651412788GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 2H.
OX590756.1:649308895-649308918
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC649308895GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590763.1:652143499-652143522
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC652143499GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638654.1:653904092-653904115
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC653904092GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638750.1:658765975-658765998
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC658765975GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638764.1:653173535-653173558
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC653173535GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638778.1:644926517-644926540
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC644926517GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638785.1:648977695-648977718
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC648977695GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX638792.1:647231467-647231490
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC647231467GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638820.1:651021049-651021072
GTAGTCGGGGCCGCCGCCGGTTGTGGCGCC651021049GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638827.1:649832696-649832719
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC649832696GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638869.1:652301094-652301117
GTAGTCGGGGCCGCCGCCGGTGGTGGCGCC652301094GTAGCTGCCCTTCCCCTCGTTCACCCTGATGAGGGCCGGGCAGTTGACCCGGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gtagctgcccttcccctcgttcac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gtagctgcccttcccctcgttcac | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.543 | 0.534 | search_plus_done; http://172.18.8.135:50400/match?q=GTAGCTGCCCTTCCCCTCGTTCAC&k=0&no_gap=0&offset=0&limit=50
0.689 | 0.146 | search_minus_done; http://172.18.8.135:50400/match?q=GTGAACGAGGGGAAGGGCAGCTAC&k=0&no_gap=0&offset=0&limit=0
0.689 | 0.000 | cgi_end;

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