GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 15:02:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS15020F11 KS15 Capsicum annuum cDNA, mRNA sequence.
GD065275.1:160-183
ATCTGGGAGATGAAGGCCTTGTTAAAAACG160GTCATAAAGGCCTCATTCTGAGTTCTAAGAATGATCATTCTGCGGCATATTTGG
TSA: Capsicum annuum MGMT_Contig38895 mRNA sequence.
JW089139.1:830-853
ATCTGGGAGATGAAGGCCTTGTTAAAAAGG830GTCATAAAGGCCTCATTCTGAGTTCTAAGAATGATCATTCTGCGGCAGATTTGG
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:161535140-161535163
ATCTGGGAGATGAAGGCCTTGTTAAAAAGG161535140GTCATAAAGGCCTCATTCTGAGTTCTAAGAATGATCATTCTGCGGCAGATTTGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:174277604-174277627
ATCTGGGAGATGAAGGCCTTGTTAAAAAGG174277604GTCATAAAGGCCTCATTCTGAGTTCTAAGAATGATCATTCTGCGGCAGATTTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gtcataaaggcctcattctgagtt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gtcataaaggcctcattctgagtt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.278 | 0.269 | search_plus_done; http://172.18.8.135:50400/match?q=GTCATAAAGGCCTCATTCTGAGTT&k=0&no_gap=0&offset=0&limit=50
0.296 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=AACTCAGAATGAGGCCTTTATGAC&k=0&no_gap=0&offset=0&limit=46
0.296 | 0.000 | cgi_end;

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