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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 08:37:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS19008D01 KS19 Capsicum annuum cDNA, mRNA sequence.
GD088102.1:57-78
AAGCCGAAACCAAAGCCTCCTCCAGTTCCC57GTCTACAAGCCGAAACCAGAACCTCCAGTTCCAAAACCAAAGCCTCCTCCAA
KS25036H10 KS25 Capsicum annuum cDNA, mRNA sequence.
GD127061.1:244-265
AAGCCGAAACCAAAGCCTCCTCCAGTTCCC244GTCTACAAGCCGAAACCAGAACCTCCAGTTCCAAAACCAAAGCCTCCTCCAA
CS01020H06 Hotpepper under oxidative stress Capsicum annuum cDNA 5', mRNA sequence.
GO344518.1:120-141
AAGCCGAAACCAAAGCCTCCTCCAGTTCCC120GTCTACAAGCCGAAACCAGAACCTCCAGTTCCAAAACCAAAGCCTCCTCCAA
TSA: Capsicum annuum EJCs80_66438, mRNA sequence.
JW152253.1:502-523
TTAAATAAACCAAAGCCTCCTCCAGTTCCC502GTCTACAAGCCGAAACCAGAACCTCCAGTTCCAAAACCAAAGCCTCCTCCAG
TSA: Capsicum annuum MA_MegaContig_29621, mRNA sequence.
JW160209.1:888-909
AAGCCGAAACCAAAGCCTCCTCCAGTTCCC888GTCTACAAGCCGAAACCAGAACCTCCAGTTCCAAAACCAAAGCCTCCTCCAG
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:173055449-173055470
AAGCCGAAACCAAAGCCTCCTCCAGTTCCC173055449GTCTACAAGCCGAAACCAGAACCTCCAGTTCCAAAACCAAAGCCTCCTCCAG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 1.
CP124719.1:144657484-144657505
AAACCAAAACCAAAGCCTCCACCAGTTCCC144657484GTCTACAAGCCGAAACCAGAACCTCCAGTTAAAAAGCCATGCCCCCCTAAAG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:184866159-184866180
AAGCCGAAACCAAAGCCTCCTCCAGTTCCC184866159GTCTACAAGCCGAAACCAGAACCTCCAGTTCCAAAACCAAAGCCTCCTCCAG
TSA: Capsicum annuum MGMT_Contig22144, mRNA sequence.
JW072388.1:1032-1053
CTGGAGGAGGCTTTGGTTTTGGAACTGGAG1032GTTCTGGTTTCGGCTTGTAGACGGGAACTGGAGGAGGCTTTGGTTTCGGCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gtctacaagccgaaaccagaac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gtctacaagccgaaaccagaac | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.715 | 0.707 | search_plus_done; http://172.18.8.135:50400/match?q=GTCTACAAGCCGAAACCAGAAC&k=0&no_gap=0&offset=0&limit=50
0.844 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=GTTCTGGTTTCGGCTTGTAGAC&k=0&no_gap=0&offset=0&limit=42
0.845 | 0.001 | cgi_end;

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