GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 06:46:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:2530266-2530285
TTTGAATGGATATGATGTGAGTTGAGTTGA2530266GTTGAGTGGCGTGGTTCAATTGCAGAGAGAGAGAGAGAGAGAGAGGAAAG
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:2842502-2842521
ATGGATTTGAATGGATATGATGTGAGTTGA2842502GTTGAGTGGCGTGGTTCAATTGCAGAGAGAGAGAGAGAGAGAGAGAGGGA
Trifolium alexandrinum microsatellite TaSSR271 sequence.
JF767769.1:99-118
GATTTGATGAATGGATATGATGTGAGTTGA99GTTGAGTGGCGTGGTTCAATTTGCAGAGAGAGAGAGAGAGAGAGAGAGAG
Medicago arabica genome assembly, chromosome: 8.
OX326971.1:3613560-3613579
ATTTGAAATGAATCAATGGATATGATGTGA3613560GTTGAGTGGCGTGGTTCAATTACATTACATTACAGAGAGAGAGAGAGAGA
Trifolium fragiferum genome assembly, chromosome: 7.
OX940795.1:38070749-38070768
GAAAGATGGATTTGAATGGATATGATGTGA38070749GTTGAGTGGCGTGGTTCAATTGCAGAGAGAGAGAGAGAGGGAGAGGAAAG
Medicago lupulina genome assembly, chromosome: 1.
OY283139.1:3545357-3545376
GATGGATTTGAATCAATGGATATGATGTGA3545357GTTGAGTGGCGTGGTTCAATTACATTACATTACACAGAGAGATGTTGCGT
Trifolium pratense DNA, clone:RC0251f.ab1.
DE245049.1:369-388
TCTTCCCTCTCTCTCTCTCTCTCTCTGCAA369ATTGAACCACGCCACTCAACTCACATCAAATCCATCTTTCCATTCTCTCT
Medicago truncatula clone mth2-161g6, WORKING DRAFT SEQUENCE, 15 unordered pieces.
AC225457.8:135804-135823
TCTCTCTCTGTGTAATGTAATGTTAATGTA135804ATTGAACCACGCCACTCAACTCACATCATATCCATTGATTCAAATCCATC
Medicago truncatula strain A17 clone mth2-55c8, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC233178.3:128056-128075
TCTCTCTCTGTGTAATGTAATGTTAATGTA128056ATTGAACCACGCCACTCAACTCACATCATATCCATTGATTCAAATCCATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gttgagtggcgtggttcaat
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gttgagtggcgtggttcaat | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGAGTGGCGTGGTTCAAT&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGAACCACGCCACTCAAC&k=0&no_gap=0&offset=0&limit=44
0.139 | 0.002 | cgi_end;

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