GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 17:49:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Medicago truncatula clone BAC MtQRRS1_F83005.5, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
JX457607.1:20197-20218
GCATTATAGTTGTTCAAATCTACAAGTCTA20197GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC
Medicago truncatula clone BAC MtQRRS1_F83005.5, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
JX457607.1:27281-27302
GCCTTATAGTTGTTCAAATCTACAAGTCTA27281GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC
Medicago truncatula clone mth2-21j3, complete sequence.
AC134049.24:81249-81270
GCATTATAGTTGTTCAAATCTACAAGTCTA81249GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC
Medicago truncatula clone mth2-21j3, complete sequence.
AC134049.24:88271-88292
GCTTTATAGTTGTTCAAATCTATAAGTTTA88271GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC
AC4100 NOLLY Medicago truncatula cDNA 5', mRNA sequence.
DY617895.1:259-280
GTGAGTATGAGGAACTTGCGAAGCTCCAAT259TTCAGTTCCATGAAAGCACAACTAGACTAGTAGATTTAAACAACTATAAGGC
AC4179 NOLLY Medicago truncatula cDNA 5', mRNA sequence.
DY617958.1:31-52
TGAGTATGAGGAACCTTGCGAAGCTCCAAT31TTCAGTTCCATGAAAGCACAACTAGACTAGTAGATTTAAACAACTATAAGGC
AC4503 NOLLY Medicago truncatula cDNA 5', mRNA sequence.
DY618211.1:580-601
GTGAGTATGAGGAACTTGCGAAGCTCCAAT580TTCAGTTCCATGAAAGCACAACTAGACTAGTAGATTTAAACAACTATAAGGC
METAL67TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY475925.1:635-656
GTAAGTATGAGGAACTTGCGAAGCTCCAAT635TTCAGTTCCATGAAAGCACAACTAAACTTATAGATTTGAACAACTATAAAGC
METBH33TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY478706.1:580-601
GTAAGTATGAGGAGCTTGCGAAGCTCCAAT580TTCAGTTCCATGAAAGCACAACTAGACTTGTAGATTTGAACAACTATAATGC
Medicago truncatula cDNA-AFLP fragment BT44M21_495 sequence.
DQ455543.1:144-165
GTAAGTATGAGGAACTTGCGAAGCTCCAAT144TTCAGTTCCATGAAAGCACAACTAGACTTGTAGATTTGAACAACTATAATGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gttgtgctttcatggaactgaa
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gttgtgctttcatggaactgaa | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.184 | 0.175 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGTGCTTTCATGGAACTGAA&k=0&no_gap=0&offset=0&limit=50
0.523 | 0.339 | search_minus_done; http://172.18.8.135:50400/match?q=TTCAGTTCCATGAAAGCACAAC&k=0&no_gap=0&offset=0&limit=46
0.527 | 0.004 | cgi_end;

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