GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:17:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS09022G03 KS09 Capsicum annuum cDNA, mRNA sequence.
CA514313.1:15-36
CTCCATTTCCCCTA15TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS09027A05 KS09 Capsicum annuum cDNA, mRNA sequence.
CA514568.1:26-47
CACAAATACTCCTCCATTTCCCCTA26TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS09030F06 KS09 Capsicum annuum cDNA, mRNA sequence.
CA514756.1:13-34
CCATTTCCCCTA13TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS09041B03 KS09 Capsicum annuum cDNA, mRNA sequence.
CA515384.1:62-83
TCCTTCACAAATACTCCTCCATTTCCCCTA62TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS09044B07 KS09 Capsicum annuum cDNA, mRNA sequence.
CA515574.1:26-47
CACAAATACTCCTCCATTTCCCCTA26TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS12008F04 KS12 Capsicum annuum cDNA, mRNA sequence.
CA522628.1:1-22
1TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS12029F07 KS12 Capsicum annuum cDNA, mRNA sequence.
CA523867.1:37-58
TCCTTCACAAATACTCCTCCATTTCCCCTA37TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS16021F04 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071420.1:45-66
TCCTTCACAAATACTCCTCCATTTCCCCTA45TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS16051H06 KS16 Capsicum annuum cDNA, mRNA sequence.
GD074281.1:45-66
TCCTTCACAAATACTCCTCCATTTCCCCTA45TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS21022J19 KS21 Capsicum annuum cDNA, mRNA sequence.
GD101230.1:38-59
GCCTTCACAAATACTCCTCCATTTCCCCTA38TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS25012D23 KS25 Capsicum annuum cDNA, mRNA sequence.
GD124915.1:44-65
TCCTTCACAAATACTCCTCCATTTCCCCTA44TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS25033G19 KS25 Capsicum annuum cDNA, mRNA sequence.
GD126798.1:44-65
TCCTTCACAAATACTCCTCCATTTCCCCTA44TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS25040J08 KS25 Capsicum annuum cDNA, mRNA sequence.
GD127410.1:44-65
TCCTTCACAAATACTCCTCCATTTCCCCTA44TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
KS26014G07 KS26 Capsicum annuum cDNA, mRNA sequence.
GD131094.1:45-66
TCCTTCACAAATACTCCTCCATTTCCCCTA45TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
CS01017C04 Hotpepper under oxidative stress Capsicum annuum cDNA 5', mRNA sequence.
GO345155.1:22-43
GCACGAGGTCCATTTCCCCTA22TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:76799262-76799283
TCCTTCACAAATACTCCTCCATTTCCCCTA76799262TAATCCTCCAATTCCTCAATGGCCATGGCAACTCAAGCTTCCCTCTTCACCC
TSA: Capsicum annuum MGMT_Contig4878, mRNA sequence.
JW055122.1:858-879
GGGTGAAGAGGGAAGCTTGAGTTGCCATGG858CCATTGAGGAATTGGAGGATTATAGGGGAAATGGAGGAGTATTTGTGAAGGA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:176613697-176613718
GGGTGAAGAGGGAAGCTTGAGTTGCCATGG176613697CCATTGAGGAATTGGAGGATTATAGGGGAAATGGAGGAGTATTTGTGAAGGA
Paspalum notatum var. saurae isolate R1 chromosome 06.
CP144750.1:14365892-14365913
TTCTGACTGTTCTAAGGTTCTTTACTACAG14365892CCATTGAGGAATTGGAGGATTATTTTCCGTCTTTCCATTTATTCTGTGGCAG
Paspalum notatum var. saurae isolate R1 chromosome 06.
CP144750.1:14439287-14439308
TTCTGACTGTTCTAAGGTTCTTTACTACAG14439287CCATTGAGGAATTGGAGGATTATTTTCCGTCTTTCCATTTATTCTGTGGCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/taatcctccaattcctcaatgg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : taatcctccaattcctcaatgg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.202 | 1.193 | search_plus_done; http://172.18.8.135:50400/match?q=TAATCCTCCAATTCCTCAATGG&k=0&no_gap=0&offset=0&limit=50
1.331 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=CCATTGAGGAATTGGAGGATTA&k=0&no_gap=0&offset=0&limit=34
1.333 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).