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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:39:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Anoura geoffroyi clone Age_21 olfactory receptor family 4 (OR4) gene, partial cds.
GQ215833.1:412-430
GCCCCCTGTCATCAAGCTCGCCTGTGCAGA412TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Anoura geoffroyi clone Age_194 olfactory receptor family 4 (OR4) gene, partial cds.
GQ215992.1:412-430
GCCCCCTGTCATCAAGCTGGCCTGTGCAGA412TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Myotis lucifugus clone Mlu_85 olfactory receptor family 4 (OR4) gene, partial cds.
GQ216822.1:412-430
GCCCCCTGTCATCAAGCTGGCCTGTGCAGA412TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Anoura geoffroyi isolate Age_83 olfactory receptor family 4 (OR4) gene, partial cds.
KC928527.1:396-414
GCCCCCTGTCATCAAGCTCGCCTGTGCAGA396TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Anoura geoffroyi isolate Age_88 olfactory receptor family 4 (OR4) gene, partial cds.
KC928532.1:396-414
GCCCCCTGTCATCAAGCTGGCCTGTGCAGA396TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Anoura geoffroyi isolate Age_163 olfactory receptor family 4 (OR4) gene, partial cds.
KC928607.1:408-426
GCCCCCTGTCATCAAGCTCGCCTGTGCAGA408TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Anoura geoffroyi isolate Age_232 olfactory receptor family 4 (OR4) gene, partial cds.
KC928676.1:408-426
GCCCCCTGTCATCAAGCTGGCCTGTGCAGA408TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Carollia perspicillata isolate Cpe_16 olfactory receptor family 4 (OR4) gene, partial cds.
KC928863.1:396-414
GCCTCCTGTCATCAAGCTGGCCTGTGCAGA396TACATACCTCACAGGAGTGCTGATGGTGTCCAATAGTGGGACCATCTCC
Leptonycteris curasoae isolate Lcu_94 olfactory receptor family 4 (OR4) gene, partial cds.
KC930268.1:411-429
GCCTCCTGTCATCAAGCTGGCCTGTGCAGA411TACATACCTCACAGGAGTGCTGATGGTGTCCAATAGTGGGACCATCTCC
Leptonycteris curasoae isolate Lcu_97 olfactory receptor family 4 (OR4) gene, partial cds.
KC930271.1:408-426
GCCTCCTGTCATCAAGCTGGCCTGTGCAGA408TACATACCTCACAGGAGTGCTGATGGTGTCCAATAGTGGGACCATCTCC
Myotis lucifugus isolate Mlu_57 olfactory receptor family 4 (OR4) gene, partial cds.
KC930914.1:396-414
GCCCCCTGTCATCAAGCTGGCCTGTGCAGA396TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Sturnira tildae isolate Sti_93 olfactory receptor family 4 (OR4) gene, partial cds.
KC932963.1:396-414
GCCTCCTGTCATCAAGCTAGCCTGTGCAGA396TACATACCTCACAGGAGTGCTGATGGTGTCCAATAGTGGGACCATCTCC
Trachops cirrhosus isolate Tci_136 olfactory receptor family 4 (OR4) gene, partial cds.
KC933276.1:396-414
GCCTCCTGTCATCAAGCTGGCCTGTGCAGA396TACATACCTCACAGGAGTGCTGATGGTGTCCAATAGTGGGACCATCTCC
Artibeus jamaicensis isolate Aja_131 olfactory receptor family 4 (OR4) gene, partial cds.
KU833597.1:387-405
GCCTCCTGTCATCAAGCTAGCCTGTGCAGA387TACATACCTCACAGGAGTGCTGATGGTGTCCAATAGTGGGACCATCTCC
Desmodus rotundus isolate Dro_112 olfactory receptor family 4 (OR4) gene, partial cds.
KU835863.1:384-402
GCCTCCTGTCATCAAGCTGGCCTGTGCAGA384TACATACCTCACAGGAGTGCTGATGGTGTCCAATAGTGGGACCATCTCC
Anoura geoffroyi isolate Age_48 olfactory receptor family 4 (OR4) gene, partial cds.
KU836169.1:408-426
GCCCCCTGTCATCAAGCTCGCCTGTGCAGA408TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Anoura geoffroyi isolate Age_74 olfactory receptor family 4 (OR4) gene, partial cds.
KU836195.1:408-426
GCCCCCTGTCATCAAGCTGGCCTGTGCAGA408TACATACCTCACAGGAGTGCTGATGGTGTCCAACAGTGGGACCATCTCC
Sylvilagus floridanus genome assembly, chromosome: 1.
OX463223.1:57867601-57867619
TGTGAATTGGACATAAACACTGTCTTTTTC57867601TACATACCTCACAGGAGTGTTGCCTGGCTCAAAGAGATCATTAGAAAAT
KBrH140F13e Brassica rapa BAC library (KBrH BAC) Brassica rapa subsp. pekinensis genomic clone KBrH140F13, genomic survey sequence.
BZ613590.1:159-177
AAACTTTTAATTGGATTGGATAGCTTTGTA159TACATACCTCACAGGAGTGGATATTGACCAGAGATTTTGGAATTATTAA
Brassica napus GSS, clone JBnB142L20, end read, primer SACL2(forward).
CU952096.1:302-320
AAACTTTTAATTGGATTGGATAGCTTTGTA302TACATACCTCACAGGAGTGGATATTGACCAGAGATTTTGGAATTATTAA
BOT01-65H5TR BOT01 Brassica oleracea genomic clone BOT01-65H5, genomic survey sequence.
FI716149.1:152-170
AAACTTTTAATTGGATTGGATAGCTTTTTA152TACATACCTCACAGGAGTGGATATTGACCAGAGATTTTGGAATTATTAA
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:6611-6629
AAACTTTTAATTGGATTGGATAGCTTTTTA6611TACATACCTCACAGGAGTGGATATTGACCAGAGATTTTGGAATTATTAA
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:69539182-69539200
TTAATAATTCCAAAATCTCTGGTCAATATC69539182CACTCCTGTGAGGTATGTATACAAAGCTATCCAATCCAATTAAAAGTTT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:53488847-53488865
TTAATAATTCCAAAATCTCTGGTCAATATC53488847CACTCCTGTGAGGTATGTATAAAAAGCTATCCAATCCAATTAAAAGTTT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41656010-41656028
TTAATAATTCCAAAATCTCTGGTCAATATC41656010CACTCCTGTGAGGTATGTATAAAAAGCTATCCAATCCAATTAAAAGTTT
Brassica napus CER1 gene, complete cds.
KF724897.1:3073-3091
TTAATAATTCCAAAATCTCTGGTCAATATC3073CACTCCTGTGAGGTATGTATAAAAAGCTATCCAATCCAATTAAAAGTTT
Brassica napus nonfunctional CER1 gene, complete sequence.
KF724898.1:3074-3092
TTAATAATTCCAAAATCTCTGGTCAATATC3074CACTCCTGTGAGGTATGTATAAAAAGCTATCCAATCCAATTAAAAGTTT
Brassica rapa subsp. chinensis CER1 (CER1) gene, complete cds.
KY751562.1:4287-4305
TTAATAATTCCAAAATCTCTGGTCAATATC4287CACTCCTGTGAGGTATGTATACAAAGCTATCCAATCCAATTAAAAGTTT
Brassica rapa genome, scaffold: A09.
LR031568.1:57665532-57665550
TTAATAATTCCAAAATCTCTGGTCAATATC57665532CACTCCTGTGAGGTATGTATACAAAGCTATCCAATCCAATTAAAAGTTT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50893950-50893968
TTAATAATTCCAAAATCTCTGGTCAATATC50893950CACTCCTGTGAGGTATGTATAAAAAGCTATCCAATCCAATTAAAAGTTT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:68189038-68189056
TTAATAATTCCAAAATCTCTGGTCAATATC68189038CACTCCTGTGAGGTATGTATACAAAGCTATCCAATCCAATTAAAAGTTT
Brassica oleracea var. capitata fatty acid hydroxylase (CER1) gene, complete cds.
MK878728.1:3074-3092
TTAATAATTCCAAAATCTCTGGTCAATATC3074CACTCCTGTGAGGTATGTATAAAAAGCTATCCAATCCAATTAAAAGTTT
Siphonodentalium dalli isolate Sc116.8C chromosome IV.
CP136064.1:69680117-69680135
CTAACGCAGGTGTAGTTGTTTTCTGTTTGT69680117CACTCCTGTGAGGTATGTAGTAATTTTGTTCTCCATTTCGGACTTTTTT
Urophora cardui genome assembly, chromosome: 2.
OY482671.1:86212799-86212817
GTATAAATATTTGCTGAATTTGCTTATCAA86212799CACTCCTGTGAGGTATGTACGATTTTTAAGTTAAAAATGGACTAGCATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tacatacctcacaggagtg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tacatacctcacaggagtg | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.230 | 0.222 | search_plus_done; http://172.18.8.135:50400/match?q=TACATACCTCACAGGAGTG&k=0&no_gap=0&offset=0&limit=50
0.370 | 0.140 | search_minus_done; http://172.18.8.135:50400/match?q=CACTCCTGTGAGGTATGTA&k=0&no_gap=0&offset=0&limit=28
0.378 | 0.008 | cgi_end;

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