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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 08:21:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:15430017-15430038
GAATTCAGAAAACAGTTTCTGATTCTAAAT15430017TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTCTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:13850155-13850176
GAATTCAGAAAACAGTTTCTGATTCTAAAT13850155TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTCTCTCTCTCTCTCTCT
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:15277711-15277732
GAATTCAGAAAACAGTTTCTGATTCTAAAT15277711TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:15591020-15591041
GAATTCAGAAAACAGTTTCTGATTCTAAAT15591020TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTTTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 15.
OU744556.1:15520040-15520061
GAATTCAGAAAACAGTTTCTGATTCTAAAT15520040TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:15497731-15497752
GAATTCAGAAAACAGTTTCTGATTCTAAAT15497731TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTCTCTCTCTCTCTCTAT
Malus domestica genome assembly, chromosome: 15.
OU745005.1:15438376-15438397
GAATTCAGAAAACAGTTTCTGATTCTAAAT15438376TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTTTCTCTCTCTCTCTCT
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:12619101-12619122
GAATTCAGAAAACAGTTTCTGATTCTAAAT12619101TACTCTGGAGGGTATGTCAAAGTTTGTTCTCTCTCTCTCTCTCTCATCTGTT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:37653190-37653211
AGAGAGAGAGAGAGAGAGAGAGAGAACAAA37653190CTTTGACATACCCTCCAGAGTAATTTAGAATCAGAAACTGTTTTCTGAATTC
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:40880029-40880050
AGAGAGAGAGAGAGAAAGAGAGAGAACAAA40880029CTTTGACATACCCTCCAGAGTAATTTAGAATCAGAAACTGTTTTCTGAATTC
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:36818367-36818388
AGAGAGAGAGAGAGAAAGAGAGAGAACAAA36818367CTTTGACATACCCTCCAGAGTAATTTAGAATCAGAAACTGTTTTCTGAATTC
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:37908821-37908842
ATAGAGAGAGAGAGAGAGAGAGAGAACAAA37908821CTTTGACATACCCTCCAGAGTAATTTAGAATCAGAAACTGTTTTCTGAATTC
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:37157129-37157150
AGAGAGAGAGAGAGAGAGAGAGAGAACAAA37157129CTTTGACATACCCTCCAGAGTAATTTAGAATCAGAAACTGTTTTCTGAATTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tactctggagggtatgtcaaag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tactctggagggtatgtcaaag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.329 | 0.320 | search_plus_done; http://172.18.8.135:50400/match?q=TACTCTGGAGGGTATGTCAAAG&k=0&no_gap=0&offset=0&limit=50
0.443 | 0.115 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTGACATACCCTCCAGAGTA&k=0&no_gap=0&offset=0&limit=42
0.447 | 0.003 | cgi_end;

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