GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 16:52:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jmsf13l19, 5' end.
CJ738338.1:117-140
GCACAGTGAGAATGGAGGCAAAGCAGAAAA117GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG
Ipomoea nil cDNA clone:jmsf15f11, 5' end.
CJ738875.1:121-144
GCACAGTGAGAATGGAGGCAAAGCAGAAAA121GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG
Ipomoea nil cDNA clone:jmsf36a07, 5' end.
CJ746963.1:116-139
GCACAGTGAGAATGGAGGCAAAGCAGAAAA116GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG
Ipomoea nil cDNA clone:jmsf39d07, 5' end.
CJ748114.1:117-140
GCACAGTGAGAATGGAGGCAAAGCAGAAAA117GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG
Ipomoea nil cDNA clone:jmsf6i10, 5' end.
CJ752154.1:117-140
GCACAGTGAGAATGGAGGCAAAGCAGAAAA117GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG
Ipomoea nil cDNA clone:jmsf41f21, 5' end.
CJ753520.1:117-140
GCACAGTGAGAATGGAGGCAAAGCAGAAAA117GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG
Ipomoea trifida cultivar NCNSP0306 chromosome 7.
CP025650.1:2582880-2582903
GCACAGTGATAATGGAGGGAAAGCAGAAAA2582880GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG
Ipomoea triloba cultivar NCNSP0323 chromosome 7.
CP025666.1:2757680-2757703
GCACAGTGAGAATGGAGGGAAAGCAGAGAA2757680GGGAGAAGCAAAAGCTCATTGCTATCACCGGCGCCGCTGCTCTTCTCGCCGTCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/tagcaatgagcttttgcttctccc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : tagcaatgagcttttgcttctccc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.125 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=TAGCAATGAGCTTTTGCTTCTCCC&k=0&no_gap=0&offset=0&limit=50
0.339 | 0.213 | search_minus_done; http://172.18.8.135:50400/match?q=GGGAGAAGCAAAAGCTCATTGCTA&k=0&no_gap=0&offset=0&limit=50
0.344 | 0.005 | cgi_end;

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