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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:41:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ipomoea nil cDNA clone:jm1h17, 3' end, single read.
BJ568143.1:60-83
GGTGTCTGTCATCCTTTTAATAATTTAATC60TATAGGATGATGCAAGGCAGAGCAAGACAGAAAAGGAAGAAGAAAAAATCACAA
Ipomoea nil cDNA clone:jm17e18, 3' end, single read.
BJ571321.1:52-75
GGTGTCTGTCATCCTTTTAATAATTTAATC52TATAGGATGATGCAAGGCAGAGCAAGACAGAAAAGGAAGAAGAAAAAATCACAA
Ipomoea nil cDNA clone:jm23k16, 3' end, single read.
BJ573378.1:48-71
GGTGTCTGTCATCCTTTTAATAATTTAATC48TATAGGATGATGCAAGGCAGAGCAAGACAGAAAAGGAAGAAGAAAAAATCACAA
Ipomoea nil cDNA clone:jmsf1i04, 3' end.
CJ759211.1:52-75
GGTGTCTGTCATCCTTTTAATAATTTAATC52TATAGGATGATGCAAGGCAGAGCAAGACAGAAAAGGAAGAAGAAAAAATCACAA
Ipomoea nil cDNA clone:jmsf8g18, 3' end.
CJ769205.1:39-62
GGTGTCTGTCATCCTTTTAATAATTTAATC39TATAGGATGATGCAAGGCAGAGCAAGACAGAAAAGGAAGAAGAAAAAATCACAA
Ipomoea nil mRNA, clone: jm45e08, 3' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY920429.1:115-138
GGTGTCTGTCATCCTTTTAATAATTTAATC115TATAGGATGATGCAAGGCAGAGCAAGACAGAAAAGGAAGAAGAAAAAATCACAA
Ipomoea nil DNA, BAC clone: JMHiBa-028O15, sequence: JMHiBa-028O15.b.
GA939461.1:190-213
GGTGTCTGTCATCCTTTTAATAATTTAATC190TATAGGATGATGCAAGGCAGAGCAAGACAGAAAAGGAAGAAGAAAAAATCACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tataggatgatgcaaggcagagca
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tataggatgatgcaaggcagagca | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.431 | 0.422 | search_plus_done; http://172.18.8.135:50400/match?q=TATAGGATGATGCAAGGCAGAGCA&k=0&no_gap=0&offset=0&limit=50
0.525 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTCTGCCTTGCATCATCCTATA&k=0&no_gap=0&offset=0&limit=43
0.525 | 0.000 | cgi_end;

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