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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 20:03:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS01073E06 KS01 Capsicum annuum cDNA, mRNA sequence.
BM064979.1:264-287
TATCAGCTGCTGAGAAATCTGGACTCTCTT264TATCGACAATTGAGAGACTTGGTCTTCTTTCCAAAGCCGAAGAATCGGGGATTC
KS04199T70 KS04 Capsicum chinense cDNA, mRNA sequence.
CB185082.1:207-230
TATCAGCTGCTGAGAAATCTGGACTCTCTT207TATCGACAATTGAGAGACTTGGTCTTCTTTCCAAAGCCGAAGAATCGGGGATTC
Solanum melongena mRNA, clone: MLF07C03, 5'end, expressed in leaf at fully expanded leaf.
FS026602.1:294-317
TATCAGCTGCTGAGAAATCTGGGTTCTCTT294TATCGACAATTGAGAGACTTGGTCTCCTTTCGAAAGCCGAAGAATTGGGGATTC
Solanum melongena mRNA, clone: PED06D18, 5'end, expressed in peduncle at anthesis.
FS036514.1:354-377
TATCAGCTGCTGAGAAATCTGGGTTCTCTT354TATCGACAATTGAGAGACTTGGTCTTCTTTCGAAAGCCGAAGAATTGGGGATTC
Solanum melongena mRNA, clone: PLA03K21, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS044308.1:354-377
TATCAGCTGCTGAGAAATCTGGGTTCTCTT354TATCGACAATTGAGAGACTTGGTCTTCTTTCG
Solanum torvum mRNA, clone: TVL30L11, 5'end, expressed in leaf at vegetative stage, 2 months after germination.
FS104221.1:294-317
TATCAGCTGCTGAGAAATCTGGACTCTCTT294TATCGACAATTGAGAGACTTGGTCTTCTTTCGAAAGCCGAAGAATTGGGGATTC
TSA: Capsicum annuum MGMT_Contig38536 mRNA sequence.
JW088780.1:447-470
TATCAGCTGCTGAGAAATCTGGACTCTCTT447TATCGACAATTGAGAGACTTGGTCTTCTTTCCAAAGCCGAAGAATCGGGGATTC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:14591556-14591579
TATCAGCTGCTGAGAAATCTGGACTCTCTT14591556TATCGACAATTGAGAGACTTGGTCTTCTTTCCAAAGCCGAAGAATCGGGGATTC
Solanum melongena mRNA, clone: MLF07C03, 3'end, expressed in leaf at fully expanded leaf.
FS026603.1:406-429
GAATCCCCAATTCTTCGGCTTTCGAAAGGA406GACCAAGTCTCTCAATTGTCGATAAAGAGAACCCAGATTTCTCAGCAGCTGATA
Solanum melongena mRNA, clone: PED06D18, 3'end, expressed in peduncle at anthesis.
FS036515.1:307-330
GAATCCCCAATTCTTCGGCTTTCGAAAGAA307GACCAAGTCTCTCAATTGTCGATAAAGAGAACCCAGATTTCTCAGCAGCTGATA
Solanum melongena mRNA, clone: PLA03K21, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS044309.1:387-410
GAATCCCCAATTCTTCGGCTTTCGAAAGAA387GACCAAGTCTCTCAATTGTCGATAAAGAGAACCCAGATTTCTCAGCAGCTGATA
Solanum melongena mRNA, clone: SmFL14M01, 3'end.
FS076174.1:434-457
GAATCCCCAATTCTTCGGCTTTCGAAAGAA434GACCAAGTCTCTCAATTGTCGATAAAGAGAACCCAGATTTCTCAGCAGCTGATA
Solanum torvum mRNA, clone: TVL30L11, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS104222.1:308-331
GAATCCCCAATTCTTCGGCTTTCGAAAGAA308GACCAAGTCTCTCAATTGTCGATAAAGAGAGTCCAGATTTCTCAGCAGCTGATA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:277192162-277192185
GAATCCCCGATTCTTCGGCTTTGGAAAGAA277192162GACCAAGTCTCTCAATTGTCGATAAAGAGAGTCCAGATTTCTCAGCAGCTGATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tatcgacaattgagagacttggtc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tatcgacaattgagagacttggtc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.599 | 0.591 | search_plus_done; http://172.18.8.135:50400/match?q=TATCGACAATTGAGAGACTTGGTC&k=0&no_gap=0&offset=0&limit=50
1.197 | 0.598 | search_minus_done; http://172.18.8.135:50400/match?q=GACCAAGTCTCTCAATTGTCGATA&k=0&no_gap=0&offset=0&limit=42
1.201 | 0.004 | cgi_end;

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