GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 13:53:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS15058C08 KS15 Capsicum annuum cDNA, mRNA sequence.
GD068839.1:290-313
TTTATACCGGAACTCAAACCCAAAACATCT290TATTAGCAACCTCATCTGTTACGCAACAAACTAATAATACTAAGTAAGAAGGAC
KS21062O04 KS21 Capsicum annuum cDNA, mRNA sequence.
GD104772.1:285-308
TTTATACCGGAACTCAAACCCAAAACATCT285TATTAGCAACCTCATCTGTTACGCAACAAACTAATAATACTAAGTAAGAAGGAC
KS26006H06 KS26 Capsicum annuum cDNA, mRNA sequence.
GD130367.1:27-50
TACCGGAACTCAAACCCAAAACATCT27TATTAGCAACCTCATCTGTTACGCAACAAACTAATAATACTAAGTAAGAAGGAC
KS15012A02 KS15 Capsicum annuum cDNA, mRNA sequence.
GD064460.1:516-539
GTCCTTCTTACTTAGTATTATTAGTTTGTT516GCGTAACAGATGAGGTTGCTAATAAGATGTTTTGGGTTTGAGTTCCGGTAT
TSA: Capsicum annuum MGMT_Contig24962, mRNA sequence.
JW075206.1:546-569
GTCCTTCTTACTTAGTATTATTAGTTTGTT546GCGTAACAGATGAGGTTGCTAATAAGATATTTTGGGTTTGAGTTCCGGTATAAA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:172987476-172987499
GTCCTTCTTACTTAGTATTATTAGTTTGTT172987476GCGTAACAGATGAGGTTGCTAATAAGATGTTTTGGGTTTGAGTTCCGGTATAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:184801615-184801638
GTCCTTCTTACTTAGTATTATTAGTTTGTT184801615GCGTAACAGATGAGGTTGCTAATAAGATATTTTGGGTTTGAGTTCCGGTATAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/tattagcaacctcatctgttacgc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : tattagcaacctcatctgttacgc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.523 | 0.514 | search_plus_done; http://172.18.8.135:50400/match?q=TATTAGCAACCTCATCTGTTACGC&k=0&no_gap=0&offset=0&limit=50
0.657 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTAACAGATGAGGTTGCTAATA&k=0&no_gap=0&offset=0&limit=47
0.659 | 0.003 | cgi_end;

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