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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-01-09 13:02:59, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:9653771-9653795
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9653771TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica cultivar WA 38 chromosome 8B.
CP165691.1:9563384-9563408
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9563384TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica cultivar WA 38 chromosome 8A.
CP165708.1:9291884-9291908
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9291884TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica cultivar Golden Delicious chromosome 08.
CP168772.1:9800866-9800890
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9800866TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica cultivar Golden Delicious chromosome 08.
CP168789.1:9475159-9475183
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9475159TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:9346231-9346255
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9346231TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 8.
OU696684.1:9294322-9294346
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9294322TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 8.
OU744549.1:9460093-9460117
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9460093TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 8.
OU744960.1:9395442-9395466
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9395442TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 8.
OU744998.1:9665039-9665063
GGTTTTTAAGAAGAGAAAACCCCCTTAATT9665039TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTTCTCTCTCTCTCTCTCT
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:9909481-9909505
GGTTTTTAAGATGAGAAAACCCCCTTAATT9909481TCAGACAGAAGAGGAACTGTATTTGTATTCACATCATTCCTCTCTCTCTCTCTCT
Sequence 10611 from patent US 10184131.
MM598528.1:134-158
AGAGAGAGAGAGAGAGAAATGATGTGAATA134CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Sequence 10884 from patent US 10184131.
MM598801.1:134-158
AGAGAGAGAGAGAGAGAAATGATGTGAATA134CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Sequence 10936 from patent US 10184131.
MM598853.1:134-158
AGAGAGAGAGAGAGAGAAATGATGTGAATA134CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
001116AAOA001138HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA001138, mRNA sequence.
EB119194.1:134-158
AGAGAGAGAGAGAGAGAAATGATGTGAATA134CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
030109ABNB001486HT (ABNB) Braeburn cultured fruit cells, boron exposed, phytoremediation Malus domestica cDNA clone ABNB001486, mRNA sequence.
EB155238.1:57-81
AGAGAGAGAGAGAGAGAAATGATGTGAATA57CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:20081988-20082012
AGAGAGAGAGAGAGAGAAATAATGTGAATA20081988CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:21204396-21204420
AGAGAGAGAGAGAGAGAAATGATGTGAATA21204396CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:20504678-20504702
AGAGAGAGAGAGAGAGGAATGATGTGAATA20504678CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCATCTTAAAAACC
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141977.1:20694946-20694970
AGAGAGAGAGAGAGAGAAATGATGTGAATA20694946CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Malus domestica cultivar Red Fuji chromosome 8.
CP147800.1:21619888-21619912
AGAGAGAGAGAGAGAGAAATGATGTGAATA21619888CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Malus domestica cultivar Red Fuji chromosome 8.
CP147825.1:20855560-20855584
AGAGAGAGAGAGAGAGAAATGATGTGAATA20855560CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC
Malus x domestica putative HB8 HD-ZipIII mRNA, complete cds.
FJ177427.1:134-158
AGAGAGAGAGAGAGAGAAATGATGTGAATA134CAAATACAGTTCCTCTTCTGTCTGAAATTAAGGGGGTTTTCTCTTCTTAAAAACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tcagacagaagaggaactgtatttg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tcagacagaagaggaactgtatttg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.097 | search_plus_done; http://172.18.8.135:50800/match?q=TCAGACAGAAGAGGAACTGTATTTG&k=0&no_gap=0&offset=0&limit=50
0.387 | 0.280 | search_minus_done; http://172.18.8.135:50800/match?q=CAAATACAGTTCCTCTTCTGTCTGA&k=0&no_gap=0&offset=0&limit=39
0.395 | 0.008 | cgi_end;

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