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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:26:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ipomoea trifida cultivar NCNSP0306 chromosome 1.
CP025644.1:31784331-31784354
AACCCCATCACAGTGCTTATGAAACCCATC31784331TCAGATCTTCTTCGAAATCTCCGCTACAATTCTCTGCAAAACCTTCCACAAAAA
Ipomoea triloba cultivar NCNSP0323 chromosome 1.
CP025660.1:37572876-37572899
AACCCCATTATAGTGCTTATGAACCCCATC37572876TCAGATCTTCTTCGAAATCTCCGCTACAATTCTCTGCAAAACCTTCCACAAAAA
Ipomoea nil cDNA clone:jmsf38h15, 5' end.
CJ747845.1:258-281
TTTTTGTGGAAGGTTTTGCAGAGAATTGTA258GCGGAGATTTCGAAGAAGATCTGAGATGGGTTTCATAAGCACTGTAATGGGGTT
Ipomoea nil cDNA clone:jmsf3j19, 5' end.
CJ748621.1:161-184
TTTTTGTGGAAGGTTTTGCAGAGAATTGTA161GCGGAGATTTCGAAGAAGATCTGAGATGGGTTTCATAAGCACTGTAATGGGGTT
Ipomoea nil cDNA clone:jmsf48b21, 5' end.
CJ749500.1:38-61
GCAAAGGATAGGGTTTTGCAGAGAATTGTA38GCGGAGATTTCGAAGAAGATCTGAGATGGGTTTCATAAGCACTGTAATGGGGTT
Ipomoea nil cDNA clone:jmsf5b24, 5' end.
CJ751651.1:218-241
TTTTTGTGGAAGGTTTTGCAGAGAATTGTA218GCGGAGATTTCGAAGAAGATCTGAGATGGGTTTCATAAGCACTGTAATGGG
sp_d13_54 Sweetpotato cDNA library D Ipomoea batatas cDNA 5', mRNA sequence.
EE880091.1:158-181
TATTCACCCCTTTATGCTCCAAGAATTGTA158GCGGAGATTTCGAAGAAGATCTGAGATGGGTTTCATAAGCACTGTGATGGGGTT
TSA: Ipomoea batatas Contig_964.Ipbalsr mRNA sequence.
JP105552.1:131-154
TAACTGTACTTGGTTTTGCAGAGAATTGTA131GCGGAGATTTCGAAGAAGATCTGAGATGGGGTTCATAAGCACTATAATGGGGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tcagatcttcttcgaaatctccgc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tcagatcttcttcgaaatctccgc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGATCTTCTTCGAAATCTCCGC&k=0&no_gap=0&offset=0&limit=50
0.449 | 0.264 | search_minus_done; http://172.18.8.135:50400/match?q=GCGGAGATTTCGAAGAAGATCTGA&k=0&no_gap=0&offset=0&limit=48
0.453 | 0.004 | cgi_end;

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