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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 21:14:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

ix39a02.b1 Sub-library of four pooled sorghum BAC clones: c0067H24, c0033O02, c0047E15, and c0018I13 Sorghum bicolor genomic, genomic survey sequence.
ED498870.1:268-286
AGTCCGTCGGCAAGGAGCGTCTCCGCAGTG268TCATATGGCGAAGCTGGAGCCGCTTGGGCAGTAGGGCGTGGGCCGTGTG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR812264.1:642808915-642808933
CGGAACCATCCAAGGTTAAGTTTACTAGGA642808915TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828090.1:607172756-607172774
CGGAACCATCCAAGGTTAAGTTTACTAGGA607172756TCATATGGCGAAGCTGGAGGCGACGGCGTTGCAGTGACTTCGGGTACCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828097.1:608203230-608203248
CGGAACCATCCAAGGTTAAGTTTACTAGGA608203230TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828111.1:591661508-591661526
CGGAACCATCCAAGGTTAAGTTTACTAGGA591661508TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828142.1:658933880-658933898
CGGAACCATCCAAGGTTAAGTTTACTAGGA658933880TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828163.1:633418110-633418128
CGGAACCATCCAAGGTTAAGTTTACTAGGA633418110TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828269.1:615744091-615744109
CGGAACCATCCAAGGTTAAGTTTACTAGGA615744091TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828276.1:639668091-639668109
CGGAACCATCCAAGGTTAAGTTTACTAGGA639668091TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OU015704.1:626843944-626843962
CGGAACCATCCAAGGTTAAGTTTACTAGGA626843944TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OU701466.1:559284342-559284360
CGGAACCATCCAAGGTTAAGTTTACTAGGA559284342TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX459926.1:602532687-602532705
CGGAACCATCCAAGGTTAAGTTTACTAGGA602532687TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX459933.1:604654960-604654978
CGGAACCATCCAAGGTTAAGTTTACTAGGA604654960TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX459933.1:604708084-604708102
CGGAACCATCCAAGGTTAAGTTTACTAGGA604708084TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX459973.1:606601952-606601970
CGGAACCATCCAAGGTTAAGTTTACTAGGA606601952TCATATGGCGAAGCTGGAGGCGACGGCGTTGCAGTGACTTCGGGTACCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX459994.1:595969237-595969255
CGGAACCATCCAAGGTTAAGTTTACTAGGA595969237TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460008.1:597282103-597282121
CGGAACCATCCAAGGTTAAGTTTACTAGGA597282103TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTACCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460015.1:605370282-605370300
CGGAACCATCCAAGGTTAAGTTTACTAGGA605370282TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460022.1:598459770-598459788
CGGAACCATCCAAGGTTAAGTTTACTAGGA598459770TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460029.1:604913980-604913998
CGGAACCATCCAAGGTTAAGTTTACTAGGA604913980TCATATGGCGAAGCTGGAGGCGACAGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460043.1:608626210-608626228
CGGAACCATCCAAGGTTAAGTTTACTAGGA608626210TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460071.1:605559189-605559207
CGGAACCATCCAAGGTTAAGTTTACTAGGA605559189TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460078.1:604337276-604337294
CGGAACCATCCAAGGTTAAGTTTACTAGGA604337276TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460092.1:607588317-607588335
CGGAACCATCCAAGGTTAAGTTTACTAGGA607588317TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTACCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460098.1:603302143-603302161
CGGAACCATCCAAGGTTAAGTTTACTAGGA603302143TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460106.1:608622743-608622761
CGGAACCATCCAAGGTTAAGTTTACTAGGA608622743TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460113.1:604361309-604361327
CGGAACCATCCAAGGTTAAGTTTACTAGGA604361309TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460127.1:603545908-603545926
CGGAACCATCCAAGGTTAAGTTTACTAGGA603545908TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460134.1:608891342-608891360
CGGAACCATCCAAGGTTAAGTTTACTAGGA608891342TCATATGGCGAAGCTGGAGGCGACGGCGTTGCAGTGACTTCGGGTACCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460141.1:605402856-605402874
CGGAACCATCCAAGGTTAAGTTTACTAGGA605402856TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460141.1:605433514-605433532
CGGAACCATCCAAGGTTAAGTTTACTAGGA605433514TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460148.1:604733943-604733961
CGGAACCATCCAAGGTTAAGTTTACTAGGA604733943TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460155.1:604141001-604141019
CGGAACCATCCAAGGTTAAGTTTACTAGGA604141001TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460169.1:600444905-600444923
CGGAACCATCCAAGGTTAAGTTTACTAGGA600444905TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460183.1:603003007-603003025
CGGAACCATCCAAGGTTAAGTTTACTAGGA603003007TCATATGGCGAAGCTGGAGGCGACGGCGGTTCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460190.1:603635601-603635619
CGGAACCATCCAAGGTTAAGTTTACTAGGA603635601TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460197.1:603357373-603357391
CGGAACCATCCAAGGTTAAGTTTACTAGGA603357373TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460204.1:604642231-604642249
CGGAACCATCCAAGGTTAAGTTTACTAGGA604642231TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460211.1:601898976-601898994
CGGAACCATCCAAGGTTAAGTTTACTAGGA601898976TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460218.1:602112482-602112500
CGGAACCATCCAAGGTTAAGTTTACTAGGA602112482TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTACCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460232.1:604497792-604497810
CGGAACCATCCAAGGTTAAGTTTACTAGGA604497792TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460239.1:602371845-602371863
CGGAACCATCCAAGGTTAAGTTTACTAGGA602371845TCATATGGCGAAGCTGGAGGCGACAGCGTTGCAGTGACTTCGGGTACCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460253.1:604029524-604029542
CGGAACCATCCAAGGTTAAGTTTACTAGGA604029524TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460267.1:608420412-608420430
CGGAACCATCCAAGGTTAAGTTTACTAGGA608420412TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460274.1:605046997-605047015
CGGAACCATCCAAGGTTAAGTTTACTAGGA605046997TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460295.1:607006735-607006753
CGGAACCATCCAAGGTTAAGTTTACTAGGA607006735TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460302.1:604575275-604575293
CGGAACCATCCAAGGTTAAGTTTACTAGGA604575275TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460309.1:604747235-604747253
CGGAACCATCCAAGGTTAAGTTTACTAGGA604747235TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590737.1:595540671-595540689
CGGAACCATCCAAGGTTAAGTTTACTAGGA595540671TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590742.1:625009161-625009179
CGGAACCATCCAAGGTTAAGTTTACTAGGA625009161TCATATGGCGAAGCTGGAGGCGACGGCGTTGCAGTGACTTCGGGTACCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590751.1:601612631-601612649
CGGAACCATCCAAGGTTAAGTTTACTAGGA601612631TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTACCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590765.1:601762101-601762119
CGGAACCATCCAAGGTTAAGTTTACTAGGA601762101TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590765.1:601790574-601790592
CGGAACCATCCAAGGTTAAGTTTACTAGGA601790574TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590765.1:601819047-601819065
CGGAACCATCCAAGGTTAAGTTTACTAGGA601819047TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX638656.1:605080216-605080234
CGGAACCATCCAAGGTTAAGTTTACTAGGA605080216TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638745.1:608846131-608846149
CGGAACCATCCAAGGTTAAGTTTACTAGGA608846131TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX638752.1:604147923-604147941
CGGAACCATCCAAGGTTAAGTTTACTAGGA604147923TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638766.1:604425843-604425861
CGGAACCATCCAAGGTTAAGTTTACTAGGA604425843TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638773.1:600837133-600837151
CGGAACCATCCAAGGTTAAGTTTACTAGGA600837133TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638780.1:606713122-606713140
CGGAACCATCCAAGGTTAAGTTTACTAGGA606713122TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX638787.1:601564407-601564425
CGGAACCATCCAAGGTTAAGTTTACTAGGA601564407TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
OX638794.1:602507200-602507218
CGGAACCATCCAAGGTTAAGTTTACTAGGA602507200TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638801.1:605054719-605054737
CGGAACCATCCAAGGTTAAGTTTACTAGGA605054719TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare genome assembly, chromosome: 4H.
OX638822.1:605368755-605368773
CGGAACCATCCAAGGTTAAGTTTACTAGGA605368755TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTACCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638829.1:606748033-606748051
CGGAACCATCCAAGGTTAAGTTTACTAGGA606748033TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638871.1:610274508-610274526
CGGAACCATCCAAGGTTAAGTTTACTAGGA610274508TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638878.1:600635635-600635653
CGGAACCATCCAAGGTTAAGTTTACTAGGA600635635TCATATGGCGAAGCTGGAGGCGACGGCGGTGCAGTGACTTCGGGTATCT
Xestia c-nigrum genome assembly, chromosome: 3.
OU745246.1:7716284-7716302
TGGCTGAGGACAAAGCAAAACTGTGGGCCC7716284TCATATGGCGAAGCTGGAGCCCCAAGACAGCAGCTGTCTCGGGGCTCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tcatatggcgaagctggag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tcatatggcgaagctggag | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.403 | 0.395 | search_plus_done; http://172.18.8.135:50400/match?q=TCATATGGCGAAGCTGGAG&k=0&no_gap=0&offset=0&limit=50
0.514 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCAGCTTCGCCATATGA&k=0&no_gap=0&offset=0&limit=0
0.515 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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